Skip to content

Issues: brainglobe/brainglobe-atlasapi

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

65 Open 104 Closed
65 Open 104 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

[Feature] Add the Australian Mouse Brain Mapping Consortium Atlas enhancement New feature or request new-atlas
#319 opened Jul 5, 2024 by PolarBean
1
[Feature] Add the Developmental Mouse Brain atlas (DeMBA) enhancement New feature or request new-atlas
#318 opened Jul 4, 2024 by adamltyson
[Feature] support Marmoset Brain Mapping resource atlases new-atlas
#316 opened Jul 1, 2024 by alessandrofelder
[Feature] support SAM (subcortical atlas of the marmoset) new-atlas
#315 opened Jul 1, 2024 by alessandrofelder
Remove inspect_meshes_folder? enhancement New feature or request
#311 opened Jun 18, 2024 by adamltyson
[Feature] Just one Kim dev top-level mesh enhancement New feature or request
#307 opened Jun 3, 2024 by alessandrofelder
[Feature] Smooth Kim meshes enhancement New feature or request
#306 opened May 30, 2024 by alessandrofelder
1
Ensure tests do not affect local system when run locally. enhancement New feature or request
#302 opened May 20, 2024 by adamltyson
Move atlas generation code out of the brainglobe-atlasapi package enhancement New feature or request
#295 opened May 16, 2024 by adamltyson
Atlas resolution as an attribute, not a name. enhancement New feature or request
#294 opened May 16, 2024 by adamltyson
Enforce standardised orientation enhancement New feature or request
#293 opened May 16, 2024 by adamltyson
Save atlases to .brainglobe/atlases enhancement New feature or request
#291 opened May 15, 2024 by adamltyson
Standardise the axial resolution of the allen spinal cord atlas enhancement New feature or request
#289 opened May 13, 2024 by adamltyson
1
Use pooch to download data enhancement New feature or request
#284 opened May 10, 2024 by adamltyson
[Feature] flexibly generate atlases with different resolutions enhancement New feature or request
#280 opened May 9, 2024 by alessandrofelder
Add updated version of the kim atlas enhancement New feature or request
#279 opened May 7, 2024 by adamltyson
1
deal with local and remote atlas versions in validate_atlases.py bug Something isn't working enhancement New feature or request
#274 opened May 2, 2024 by viktorpm
@viktorpm
9
Decide what to do with atlas_generation/main_script enhancement New feature or request
#273 opened Apr 30, 2024 by adamltyson
1
[Feature] Add Ambystoma mexicanum (axolotl) atlas enhancement New feature or request new-atlas
#270 opened Apr 19, 2024 by adamltyson
[BUG] Hemisphere map not correctly set for mpin_zfish_1um_v1.0 bug Something isn't working
#268 opened Apr 12, 2024 by PolarBean
@alessandrofelder @viktorpm
2
[Feature] Are there plans for developing an online version of BrainGlobe-atlasapi? enhancement New feature or request
#267 opened Apr 12, 2024 by PolarBean
3
[Feature] Functionality to validate an newly-generated local atlas given a path enhancement New feature or request
#260 opened Mar 26, 2024 by alessandrofelder
@alessandrofelder
Add a a prarie vole atlas? enhancement New feature or request new-atlas
#250 opened Feb 28, 2024 by adamltyson
[Feature] fixtures to mock invalid atlases atlasgen Issue was transferred from the retired bg-atlasgen. Concerns the atlas_generation submodule. enhancement New feature or request
#200 opened Feb 19, 2024 by alessandrofelder
A first pass at regenerating atlases that fail our validation scripts atlasgen Issue was transferred from the retired bg-atlasgen. Concerns the atlas_generation submodule. enhancement New feature or request
#201 opened Feb 12, 2024 by alessandrofelder
4 tasks
@viktorpm
10
ProTip! Updated in the last three days: updated:>2024-07-04.