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brineylab

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  1. abstar abstar Public

    VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.

    Python 42 16

  2. grp-paper grp-paper Public

    Code and data used in The Great Repertoire Project

    Jupyter Notebook 30 10

  3. BALM-paper BALM-paper Public

    Jupyter Notebook 17 5

  4. antiref antiref Public

    AntiRef: reference clusters of human antibody sequences

    Jupyter Notebook 12 3

  5. abutils abutils Public

    Python 7 4

  6. scab scab Public

    Python 4 3

Repositories

Showing 10 of 20 repositories
  • jupyterhub-config Public
    brineylab/jupyterhub-config’s past year of commit activity
    Python 0 0 0 0 Updated Feb 28, 2025
  • BALM Public

    BALM: baseline antiobdy language model

    brineylab/BALM’s past year of commit activity
    Python 0 GPL-3.0 2 0 0 Updated Feb 26, 2025
  • containers Public
    brineylab/containers’s past year of commit activity
    Dockerfile 0 2 0 0 Updated Feb 26, 2025
  • preferential-masking-paper Public
    brineylab/preferential-masking-paper’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Feb 18, 2025
  • abutils Public
    brineylab/abutils’s past year of commit activity
    Python 7 MIT 4 0 1 Updated Feb 14, 2025
  • abstar Public

    VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.

    brineylab/abstar’s past year of commit activity
    Python 42 MIT 16 5 0 Updated Feb 14, 2025
  • scab Public
    brineylab/scab’s past year of commit activity
    Python 4 MIT 3 1 1 Updated Jan 24, 2025
  • deepspeed Public
    brineylab/deepspeed’s past year of commit activity
    Python 0 0 0 0 Updated Jan 15, 2025
  • antibodydesign Public
    brineylab/antibodydesign’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Jan 13, 2025
  • BALM-paper Public
    brineylab/BALM-paper’s past year of commit activity
    Jupyter Notebook 17 MIT 5 1 0 Updated Jan 3, 2025
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