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Uses the array data structure for ParticleField and pullbacks for AD #13

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Uses the array data structure for ParticleField and pullbacks for AD #13

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cibinjoseph
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This PR is to review the changes made and make sure everything looks good. This may not need to be merged into master immediately.

@rymanderson
use MVectors
3b41d05
@rymanderson
add more benchmarks to script
6271257
@rymanderson
update FMM
5ff91fc
@rymanderson
passing unit tests with FLOWFMM
2b99805
@rymanderson
replace abstract ::Function type definition with concrete parameteric…
bf0682c 
… type
@rymanderson
bug fix
b96b2e8
@rymanderson
made UJ type-stable (matching ExaFMM benchmarks)
e7edc2c
@rymanderson
bug fix
2e4de05
@rymanderson
prepare benchmark
97daa09
@rymanderson
prep new benchmark
189b009
@rymanderson
passing unit tests
40f856f
@rymanderson
make expansion_order consistent and prep benchmark
b31c96f
@rymanderson
prep benchmark with fmm
1caa44d
@rymanderson
specify julia-1.6
78bf00b
@rymanderson
allow changing pfield.Uinf by using less restrictive type
56d5d34
@rymanderson
bug fix
c106932
@rymanderson
remove duplicate eltype definition
69bcba8
@rymanderson
add nonzero_sigma parameter
2c8f93d
@rymanderson
change nonzero_sigma default =false
8b6271e
@rymanderson
initialize particle field with custom float type
d9b28e7
@rymanderson
merge conflict on workstation
1101eb6
@rymanderson
ForwardDiff compatibility
c163a52
@rymanderson
add custom_UJ function
ceeaac6
@rymanderson
working with panels
ad44787
@rymanderson
fix viscous and SFS syntax error
df9de1a
@rymanderson
update fields explicitly in remove_particle
4fdbf47
@rymanderson
toggle saving particle field
2ec569a
@rymanderson
update fmm syntax
73c6d13
@rymanderson
add custom_UJ function
07da72c
@rymanderson
working with panels
712650f
rymanderson and others added 30 commits July 28, 2024 03:15
@rymanderson
Add additional conditions for single self-interaction on gpu
0d5243d
Remove unnecessary view for GPU DtoH copy
a11c782
@rymanderson
Reduce register pressure by using Int32 indices
ca301de
Correct dimension of target_system particles in gpu kernel
9d211ea
@rymanderson
merge conflicts
cf387d4
@rymanderson
Correct direct_full logic
5b1b556
@rymanderson
upgrade FastMultipole 0.3.0
fb76ed1
@rymanderson
remove extraneous function parameter
6b8ba74
@rymanderson
update FastMultipole to version 0.3.0
6dc1f35
@rymanderson
add relative error option to fmm
99f8f2e
@cibinjoseph
Single gpu streams kernel
b21015f
@cibinjoseph
Add .case to end of folder name
0e6c9d4
@cibinjoseph
Add .case files to ignore
56b0caa
@cibinjoseph
Remove trial kernel
6038fb2
@cibinjoseph
Add check_shared_memory()
59c5839
@cibinjoseph
Add multiple streams multiple gpu kernel
e73c936
@rymanderson
update FastMultipole gpu syntax
65a3a3f
@cibinjoseph
Correct error in shared memory check function
2fb4c5b
@cibinjoseph
Change to in-place operation for interaction
9670101
Remove debugging override
f7be9ad
Correct igpu to istream
fa4e4e7
@cibinjoseph
Changes to gpu kernel
b7d22a2
@rymanderson
update derivativesSwitch
f4d4075
@cibinjoseph
Add nearfield_device!() for gpu direct computation
0bdfede
@cibinjoseph
Add gpu kernel changes from Cibin
b2122c4
@cibinjoseph
Correct sort function name
a6ba8de
@cibinjoseph
Correct mistake in expand_source_indices()
4914d85
@cibinjoseph
Add documentation for expand_source_indices()
7b69593
@cibinjoseph
Add multiple gpus and multiple streams to nearfield_device!()
0fbb5a4
Add gpu kernel for multiple gpus and streams
da56a2b
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@rymanderson rymanderson rymanderson left review comments

@Eric-P-Green Eric-P-Green Awaiting requested review from Eric-P-Green

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4 participants
@cibinjoseph @rymanderson @Eric-P-Green @BTV25