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API client update about Mutation Assessor v4 data and UI changes #5015

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merged 3 commits into from
Oct 8, 2024

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@leexgh leexgh commented Oct 2, 2024

Part of: genome-nexus/genome-nexus#753
There are some API model changes about Mutation Assessor v4 in genome nexus. This pr changes data display and tooltip text to work with new data
Header tooltip:
image
Data and tooltip:
image

Test link (need to add Functional Impact in column dropdown): https://deploy-preview-5015.cancerrevue.org/results/mutations?cancer_study_list=msk_impact_2017&Z_SCORE_THRESHOLD=2.0&RPPA_SCORE_THRESHOLD=2.0&profileFilter=mutations%2Cstructural_variants%2Ccna&case_set_id=msk_impact_2017_cnaseq&gene_list=BRAF&geneset_list=%20&tab_index=tab_visualize&Action=Submit

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@leexgh leexgh added the cl-package Improvements related to a package label Oct 2, 2024
@leexgh leexgh requested a review from onursumer October 3, 2024 14:27
@leexgh leexgh changed the title Changes to fit with new Mutation Assessor data model API client update about Mutation Assessor v4 data and UI changes Oct 3, 2024
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Looks good! Just added a few minor suggestions.

@leexgh leexgh force-pushed the fix-ma-v4 branch 2 times, most recently from 53f0c90 to 6cdc6a3 Compare October 3, 2024 20:20
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failing e2e tests don't seem to be related, merging.

@onursumer onursumer merged commit b51029c into cBioPortal:master Oct 8, 2024
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2 participants