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update cbioportal-core in validateStudies CI
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Related to #2013
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inodb authored Feb 27, 2024
1 parent e9d66e7 commit 9aeb579
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions .circleci/validate_changed_studies.sh
Original file line number Diff line number Diff line change
Expand Up @@ -56,13 +56,13 @@ if [[ $num_studies > 0 ]]; then
# fi
# append the first study
if [ "$validation_command" = "" ] ; then
validation_command="($HOME/cbioportal/core/src/main/scripts/importer/./validateStudies.py -d $HOME/repo/ -l $study -p $HOME/repo/.circleci/portalinfo -html $test_reports_location/$study"
validation_command="($HOME/cbioportal-core/src/main/scripts/importer/./validateStudies.py -d $HOME/repo/ -l $study -p $HOME/repo/.circleci/portalinfo -html $test_reports_location/$study"
else
# run each validation individually in the background
if [ $mod = 0 ] ; then
validation_command="${validation_command}) & ($HOME/cbioportal/core/src/main/scripts/importer/./validateStudies.py -d $HOME/repo/ -l $study -p $HOME/repo/.circleci/portalinfo -html $test_reports_location/$study"
validation_command="${validation_command}) & ($HOME/cbioportal-core/src/main/scripts/importer/./validateStudies.py -d $HOME/repo/ -l $study -p $HOME/repo/.circleci/portalinfo -html $test_reports_location/$study"
else
validation_command="${validation_command} ; $HOME/cbioportal/core/src/main/scripts/importer/./validateStudies.py -d $HOME/repo/ -l $study -p $HOME/repo/.circleci/portalinfo -html $test_reports_location/$study"
validation_command="${validation_command} ; $HOME/cbioportal-core/src/main/scripts/importer/./validateStudies.py -d $HOME/repo/ -l $study -p $HOME/repo/.circleci/portalinfo -html $test_reports_location/$study"
fi
fi
done
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