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Genetic ancestry data for all TCGA PANCAN studies (#1877)
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public/acc_tcga_pan_can_atlas_2018/meta_genetic_ancestry.txt
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cancer_study_identifier: acc_tcga_pan_can_atlas_2018 | ||
genetic_alteration_type: GENERIC_ASSAY | ||
generic_assay_type: ARMLEVEL_CNA | ||
datatype: LIMIT-VALUE | ||
stable_id: genetic_ancestry | ||
profile_name: Genetic Ancestry | ||
profile_description: Genetic ancestries were determined using five different methods as described in Carrot-Zhang et al (2020). These consensus calls were created based on the ancestral population that received the majority of assignments for each patient. The original data is <a href="https://gdc.cancer.gov/about-data/publications/CCG-AIM-2020">here</a>. | ||
data_filename: data_genetic_ancestry.txt | ||
show_profile_in_analysis_tab: true | ||
generic_entity_meta_properties: NAME |
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public/blca_tcga_pan_can_atlas_2018/data_clinical_patient.txt
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public/blca_tcga_pan_can_atlas_2018/data_genetic_ancestry.txt
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public/blca_tcga_pan_can_atlas_2018/meta_genetic_ancestry.txt
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cancer_study_identifier: blca_tcga_pan_can_atlas_2018 | ||
genetic_alteration_type: GENERIC_ASSAY | ||
generic_assay_type: GENETIC_ANCESTRY | ||
datatype: LIMIT-VALUE | ||
stable_id: genetic_ancestry | ||
profile_name: Genetic Ancestry | ||
profile_description: Genetic ancestries were determined using five different methods as described in Carrot-Zhang et al (2020). These consensus calls were created based on the ancestral population that received the majority of assignments for each patient. The original data is <a href="https://gdc.cancer.gov/about-data/publications/CCG-AIM-2020">here</a>. | ||
data_filename: data_genetic_ancestry.txt | ||
show_profile_in_analysis_tab: true | ||
generic_entity_meta_properties: NAME | ||
value_sort_order: ASC |
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public/brca_tcga_pan_can_atlas_2018/data_clinical_patient.txt
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public/brca_tcga_pan_can_atlas_2018/meta_genetic_ancestry.txt
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cancer_study_identifier: brca_tcga_pan_can_atlas_2018 | ||
genetic_alteration_type: GENERIC_ASSAY | ||
generic_assay_type: GENETIC_ANCESTRY | ||
datatype: LIMIT-VALUE | ||
stable_id: genetic_ancestry | ||
profile_name: Genetic Ancestry | ||
profile_description: Genetic ancestries were determined using five different methods as described in Carrot-Zhang et al (2020). These consensus calls were created based on the ancestral population that received the majority of assignments for each patient. The original data is <a href="https://gdc.cancer.gov/about-data/publications/CCG-AIM-2020">here</a>. | ||
data_filename: data_genetic_ancestry.txt | ||
show_profile_in_analysis_tab: true | ||
generic_entity_meta_properties: NAME | ||
value_sort_order: ASC |
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public/cesc_tcga_pan_can_atlas_2018/data_clinical_patient.txt
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public/cesc_tcga_pan_can_atlas_2018/meta_genetic_ancestry.txt
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cancer_study_identifier: cesc_tcga_pan_can_atlas_2018 | ||
genetic_alteration_type: GENERIC_ASSAY | ||
generic_assay_type: GENETIC_ANCESTRY | ||
datatype: LIMIT-VALUE | ||
stable_id: genetic_ancestry | ||
profile_name: Genetic Ancestry | ||
profile_description: Genetic ancestries were determined using five different methods as described in Carrot-Zhang et al (2020). These consensus calls were created based on the ancestral population that received the majority of assignments for each patient. The original data is <a href="https://gdc.cancer.gov/about-data/publications/CCG-AIM-2020">here</a>. | ||
data_filename: data_genetic_ancestry.txt | ||
show_profile_in_analysis_tab: true | ||
generic_entity_meta_properties: NAME | ||
value_sort_order: ASC |
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public/chol_tcga_pan_can_atlas_2018/data_clinical_patient.txt
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public/chol_tcga_pan_can_atlas_2018/meta_genetic_ancestry.txt
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,11 @@ | ||
cancer_study_identifier: chol_tcga_pan_can_atlas_2018 | ||
genetic_alteration_type: GENERIC_ASSAY | ||
generic_assay_type: GENETIC_ANCESTRY | ||
datatype: LIMIT-VALUE | ||
stable_id: genetic_ancestry | ||
profile_name: Genetic Ancestry | ||
profile_description: Genetic ancestries were determined using five different methods as described in Carrot-Zhang et al (2020). These consensus calls were created based on the ancestral population that received the majority of assignments for each patient. The original data is <a href="https://gdc.cancer.gov/about-data/publications/CCG-AIM-2020">here</a>. | ||
data_filename: data_genetic_ancestry.txt | ||
show_profile_in_analysis_tab: true | ||
generic_entity_meta_properties: NAME | ||
value_sort_order: ASC |