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Update WDPA processing #12

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Update WDPA processing #12

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b4073a5
Added wdpa-date config & new WDPA processing
Mar 26, 2021
6257420
Fixes all over the place
Mar 26, 2021
2138170
Remove temporary WDPA files
Mar 26, 2021
c0772bd
Update WDPA extraction and merging
Mar 26, 2021
c1496ad
Suppress all errors with ogrmerge
Mar 26, 2021
773d15d
Merge branch 'main' into update-wdpa-processing
Apr 7, 2021
e9137b0
Process points and polys at the same time
Apr 8, 2021
9589577
Remove excessive whitespace & unnecessary imports
Apr 8, 2021
99461f3
Merge branch 'main' into update-wdpa-processing
Apr 30, 2021
b8e77bd
Update WDPA processing to match current main
Apr 30, 2021
a8f04a0
Add new util tests
Apr 30, 2021
67c84f6
Merge branch 'main' into update-wdpa-processing
May 9, 2021
2b791b3
Update schema
May 9, 2021
585ec63
Updates following review
May 12, 2021
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1 change: 1 addition & 0 deletions config/default.yaml
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Expand Up @@ -212,6 +212,7 @@ parameters:
max-building-share: 0.01 # Above, a pixel cannot be used for energy farms. Equals roughly 900m2
max-urban-green-share: 0.01 # Above, a pixel cannot be used for energy farms. Equals roughly 900m2. Removes e.g. Berlin's Tempelhofer Feld.
nuts-year: 2010 # Choice of NUTS data to use from [2006, 2010, 2013, 2016, 2021]
wdpa-date: Mar2021 # Pointer to latest WDPA data.
scenarios:
technical-potential:
use-protected-areas: True
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6 changes: 5 additions & 1 deletion config/schema.yaml
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Expand Up @@ -8,4 +8,8 @@ properties:
type: number
enum: [2006, 2010, 2013, 2016, 2021]
default: 2016
description: Indicates the reference NUTS year
description: Indicates the reference NUTS year
wdpa-date:
type: string
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This could check for the form MMMYYYY, but maybe that's just too restrictive.

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yeah, who knows how they'll choose to do versioning in future...

enum: [Mar2021, Apr2021]
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descriptions: Indicates the latest Protected Planet WDPA year. Only the two latest datasets are available for download at any given time.
33 changes: 27 additions & 6 deletions rules/data-preprocessing.smk
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Expand Up @@ -6,7 +6,7 @@ URL_NUTS = "https://ec.europa.eu/eurostat/cache/GISCO/distribution/v2/nuts/shp/N
URL_LAU = "http://ec.europa.eu/eurostat/cache/GISCO/geodatafiles/COMM-01M-2013-SH.zip"
URL_DEGURBA = "http://ec.europa.eu/eurostat/cache/GISCO/geodatafiles/DGURBA_2014_SH.zip"
URL_LAND_COVER = "http://due.esrin.esa.int/files/Globcover2009_V2.3_Global_.zip"
URL_PROTECTED_AREAS = "https://www.protectedplanet.net/downloads/WDPA_Feb2019?type=shapefile"
URL_PROTECTED_AREAS = "http://d1gam3xoknrgr2.cloudfront.net/current/WDPA_{}_Public_shp.zip"
URL_CGIAR_TILE = "http://srtm.csi.cgiar.org/wp-content/uploads/files/srtm_5x5/TIFF/"
URL_GMTED_TILE = "https://edcintl.cr.usgs.gov/downloads/sciweb1/shared/topo/downloads/GMTED/Global_tiles_GMTED/075darcsec/mea/"
URL_GADM = "https://biogeo.ucdavis.edu/data/gadm3.6/gpkg/"
Expand Down Expand Up @@ -135,17 +135,38 @@ rule raw_land_cover:
rule raw_protected_areas_zipped:
message: "Download protected areas data as zip."
output: protected("data/automatic/raw-wdpa.zip")
shell: "curl -sLo {output} -H 'Referer: {URL_PROTECTED_AREAS}' {URL_PROTECTED_AREAS}"
params:
url = URL_PROTECTED_AREAS.format(config["parameters"]["wdpa-date"])
shell: "curl -sLo {output} -H 'Referer: {params.url}' {params.url}"
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rule raw_protected_areas:
message: "Extract protected areas data as zip."
input: rules.raw_protected_areas_zipped.output
params:
year = config["parameters"]["wdpa-date"]
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output:
polygons = "build/raw-wdpa-feb2019/WDPA_Feb2019-shapefile-polygons.shp",
polygon_data = "build/raw-wdpa-feb2019/WDPA_Feb2019-shapefile-polygons.dbf",
points = "build/raw-wdpa-feb2019/WDPA_Feb2019-shapefile-points.shp"
shell: "unzip -o {input} -d build/raw-wdpa-feb2019"
polygons = "build/raw-wdpa/wdpa-shapes.shp",
polygon_data = "build/raw-wdpa/wdpa-shapes.dbf",
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points = "build/raw-wdpa/wdpa-points.shp"
conda: "../envs/default.yaml"
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This conda env is useless here.

shell:
"""
set +e
unzip -o {input} -d build/raw-wdpa
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unzip -o build/raw-wdpa/WDPA_{params.year}-shapefile0.zip -d build/raw-wdpa/WDPA_to_merge_0
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unzip -o build/raw-wdpa/WDPA_{params.year}-shapefile1.zip -d build/raw-wdpa/WDPA_to_merge_0
unzip -o build/raw-wdpa/WDPA_{params.year}-shapefile2.zip -d build/raw-wdpa/WDPA_to_merge_0
ogrmerge.py -single -o {output.polygons} build/raw-wdpa/WDPA_to_merge_**/*-polygons.shp
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ogrmerge.py -single -o {output.polygons} build/raw-wdpa/WDPA_to_merge_**/*-points.shp
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exitcode=$?
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if [ $exitcode -eq 1 ]
then
exit 1
else
exit 0
fi
"""


rule raw_srtm_elevation_tile_zipped:
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