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update fusor version with error message fixes
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katiestahl committed Sep 25, 2024
1 parent 7644b8d commit c330832
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Showing 2 changed files with 28 additions and 4 deletions.
30 changes: 27 additions & 3 deletions requirements.txt
Original file line number Diff line number Diff line change
Expand Up @@ -8,46 +8,69 @@ asyncpg==0.29.0
attrs==24.2.0
biocommons.seqrepo==0.6.9
bioutils==0.5.8.post1
boto3==1.35.4
botocore==1.35.4
black==24.8.0
boto3==1.35.3
botocore==1.35.3
canonicaljson==2.0.0
certifi==2024.7.4
cfgv==3.4.0
charset-normalizer==3.3.2
click==8.1.7
coloredlogs==15.0.1
configparser==7.1.0
cool_seq_tool==0.7.0
coverage==7.6.1
decorator==5.1.1
distlib==0.3.8
executing==2.0.1
fastapi==0.112.1
fusor==0.4.2
filelock==3.15.4
fusor==0.4.3
ga4gh.vrs==2.0.0a10
gene-normalizer==0.4.0
h11==0.14.0
hgvs==1.5.4
httpcore==1.0.5
httpx==0.27.0
humanfriendly==10.0
identify==2.6.0
idna==3.7
importlib_metadata==8.4.0
iniconfig==2.0.0
ipython==8.26.0
jedi==0.19.1
Jinja2==3.1.4
jmespath==1.0.1
MarkupSafe==2.1.5
matplotlib-inline==0.1.7
mypy-extensions==1.0.0
nodeenv==1.9.1
packaging==24.1
Parsley==1.3
parso==0.8.4
pathspec==0.12.1
pexpect==4.9.0
platformdirs==4.2.2
pluggy==1.5.0
polars==1.5.0
pre-commit==3.8.0
prompt_toolkit==3.0.47
psycopg2==2.9.9
psycopg2-binary==2.9.9
ptyprocess==0.7.0
pure_eval==0.2.3
pydantic==2.4.2
pydantic-to-typescript2==1.0.4
pydantic_core==2.10.1
Pygments==2.18.0
pysam==0.22.1
pytest==8.3.2
pytest-asyncio==0.24.0
pytest-cov==5.0.0
python-dateutil==2.9.0.post0
PyYAML==6.0.2
requests==2.32.3
ruff==0.5.0
s3transfer==0.10.2
six==1.16.0
sniffio==1.3.1
Expand All @@ -60,6 +83,7 @@ traitlets==5.14.3
typing_extensions==4.12.2
urllib3==1.26.19
uvicorn==0.30.6
virtualenv==20.26.3
wags_tails==0.1.4
wcwidth==0.2.13
yoyo-migrations==8.2.0
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2 changes: 1 addition & 1 deletion server/pyproject.toml
Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,7 @@ dependencies = [
"click",
"boto3",
"botocore",
"fusor ~= 0.4.2",
"fusor ~= 0.4.3",
"cool-seq-tool ~= 0.7.0",
"pydantic == 2.4.2", # validation errors with more recent versions, so don't remove this specific pin
"gene-normalizer ~= 0.4.0",
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