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add script to readme
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korikuzma committed Aug 22, 2024
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6 changes: 6 additions & 0 deletions src/fusor/examples/README.md
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* `tpm3_ntrk1.json`: Example TPM3-NTRK1 assayed fusion drawn from previous VICC Fusion Curation draft material. Represented in nomenclature as `NM_152263.3(TPM3):e.1_8::NM_002529.3(NTRK1):e.10_22`.
* `tpm3_pdgfrb.json`: Example TPM3-PDGFRB assayed fusion identified via RT-PCR. Represented in nomenclature as `NM_152263.3(TPM3):e.8::NM_002609.3(PDGFRB):e.11_22`.
* `igh_myc.json`: Example of an enhancer-driven IGH-MYC categorical fusion. Represented in nomenclature as `reg_e_EH38E3121735@IGH(hgnc:5477)::MYC(hgnc:7553)`.

To generate all examples from examples directory, run the following

```shell
python3 create_examples.py
```
5 changes: 1 addition & 4 deletions src/fusor/examples/create_examples.py
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"""Script for creating JSON examples
To generate all examples: python3 src/fusor/examples/create_examples.py
"""
"""Script for creating JSON examples"""

import asyncio
import json
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