feat: Add translator modules for JAFFA and STAR-Fusion fusion detecti…

…on algorithms (#193)
cancervariants · Nov 12, 2024 · 62f51eb · 62f51eb
1 parent 8d92d3f
commit 62f51eb
Show file tree

Hide file tree

Showing 5 changed files with 1,055 additions and 0 deletions.
diff --git a/.gitignore b/.gitignore
@@ -160,3 +160,9 @@ dynamodb_local_latest/*
 
 # Build files
 Pipfile.lock
+
+# Test data
+fusor/*.txt
+fusor/*.csv
+fusor/*.tsv
+test_data/
diff --git a/pyproject.toml b/pyproject.toml
@@ -26,6 +26,7 @@ description = "Computable object representation and validation for gene fusions"
 license = {file = "LICENSE"}
 dependencies = [
     "pydantic ==2.*",
+    "polars ~= 1.0",
     "ga4gh.vrs ~=2.0.0a10",
     "biocommons.seqrepo",
     "gene-normalizer ==0.4.0",