Fix actions

.github/workflows/R-CMD-check.yaml

@@ -24,20 +24,22 @@ jobs:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
 
     steps:
-      - name: Check out repo
-        uses: actions/checkout@v2
-
-      - name: Install dependencies
-        run: |
-          dependencies <- remotes::local_package_deps(dependencies = TRUE)
-          leftovers <- setdiff(dependencies, installed.packages())
-          BiocManager::install(leftovers, ask=FALSE, Ncpu=2L)
-          BiocManager::install(c("rcmdcheck", "magick", "BiocManager", "BiocCheck"), ask=FALSE, Ncpu=2L)
-        shell: Rscript {0}
-
-      - name: Check
-        uses: r-lib/actions/check-r-package@v2
-
-      - name: BiocCheck
-        run: BiocCheck::BiocCheck(dir('check', 'tar.gz$', full.names = TRUE), `quit-with-status` = TRUE)
-        shell: Rscript {0}
+      - uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: release
+          http-user-agent: release
+          use-public-rspm: true
+
+      - name: Install Deps
+        uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          cache: true
+
+      - uses: r-lib/actions/check-r-package@v2
+
+      - name: Run BiocCheck
+        uses: insightsengineering/bioc-check-action@v1