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Fix select_all syntax
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lvreynoso committed Sep 7, 2023
1 parent c6e770f commit 1bee2ec
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion workflows/amr/run.wdl
Original file line number Diff line number Diff line change
Expand Up @@ -23,7 +23,7 @@ workflow amr {
String s3_wd_uri = ""
}
if (defined(raw_reads_0)) {
Array[File]+ raw_reads = select_all(select_first([raw_reads_0]), select_first([raw_reads_1]))
Array[File]+ raw_reads = select_all([select_first([raw_reads_0]), select_first([raw_reads_1])])

call host_filter.czid_host_filter as host_filter_stage {
input:
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