Python SDK for interacting with the cheminfo ELN
TODO show in a very small amount of space the MOST useful thing your package can do. Make it as short as possible! You have an entire set of docs for later.
The cheminfopy command line tool is automatically installed. It can
be used from the shell with the --help
flag to show all subcommands:
$ cheminfopy --help
TODO show the most useful thing the CLI does! The CLI will have documentation auto-generated by
sphinx
.
The most recent code and data can be installed directly from GitHub with:
$ pip install git+https://github.com/cheminfo-py/cheminfopy.git
To install in development mode, use the following:
$ git clone git+https://github.com/cheminfo-py/cheminfopy.git
$ cd cheminfopy
$ pip install -e .
Contributions, whether filing an issue, making a pull request, or forking, are appreciated. See CONTRIBUTING.rst for more information on getting involved.
The code in this package is licensed under the MIT License.
This package was created with @audreyfeldroy's cookiecutter package using @cthoyt's cookiecutter-snekpack template.
See developer instrutions
The final section of the README is for if you want to get involved by making a code contribution.
After cloning the repository and installing tox
with pip install tox
, the unit tests in the tests/
folder can be
run reproducibly with:
$ tox
Additionally, these tests are automatically re-run with each commit in a GitHub Action.
After installing the package in development mode and installing
tox
with pip install tox
, the commands for making a new release are contained within the finish
environment
in tox.ini
. Run the following from the shell:
$ tox -e finish
This script does the following:
- Uses BumpVersion to switch the version number in the
setup.cfg
andsrc/cheminfopy/version.py
to not have the-dev
suffix - Packages the code in both a tar archive and a wheel
- Uploads to PyPI using
twine
. Be sure to have a.pypirc
file configured to avoid the need for manual input at this step - Push to GitHub. You'll need to make a release going with the commit where the version was bumped.
- Bump the version to the next patch. If you made big changes and want to bump the version by minor, you can
use
tox -e bumpversion minor
after.