Create setup mechanism and optimize imports

This commit introduces a setup mechanism based on setuptools. As a result, it is now geared to being used as an installed package.
The imports have been modified/simplified to work with this new paradigm; import optimization has also been done in an effort to simplify and standardize the code structure.
The __load__opao.py files for configuring the path are no longer required and have been removed; the MKL availability check and additional functionality present in those files has been moved to the top level __init__.py.
The tutorials have also been modified to work with this new approach.
Instructions for installing this package have been added to the README file.

AO_modules/Detector.py → OOPAO/Detector.py

@@ -1,41 +1,44 @@
-# -*- coding: utf-8 -*-
-"""
-Created on Mon Feb 24 14:37:29 2020
-
-@author: cheritie
-"""
-
-import numpy as np
-import inspect
-class Detector:
-    def __init__(self,nRes,readoutNoise=0,photonNoise=0,QE=1):
-        self.resolution=nRes
-        self.QE=1
-        self.readoutNoise=readoutNoise
-        self.photonNoise=photonNoise        
-        self.frame=np.zeros([nRes,nRes])
-        self.tag='detector'        
-
-    def rebin(self,arr, new_shape):
-        shape = (new_shape[0], arr.shape[0] // new_shape[0],
-                 new_shape[1], arr.shape[1] // new_shape[1])        
-        out = (arr.reshape(shape).mean(-1).mean(1)) * (arr.shape[0] // new_shape[0]) * (arr.shape[1] // new_shape[1])        
-        return out
-
-# %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% END %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% 
-
-    def show(self):
-        attributes = inspect.getmembers(self, lambda a:not(inspect.isroutine(a)))
-        print(self.tag+':')
-        for a in attributes:
-            if not(a[0].startswith('__') and a[0].endswith('__')):
-                if not(a[0].startswith('_')):
-                    if not np.shape(a[1]):
-                        tmp=a[1]
-                        try:
-                            print('          '+str(a[0])+': '+str(tmp.tag)+' object') 
-                        except:
-                            print('          '+str(a[0])+': '+str(a[1])) 
-                    else:
-                        if np.ndim(a[1])>1:
+# -*- coding: utf-8 -*-
+"""
+Created on Mon Feb 24 14:37:29 2020
+
+@author: cheritie
+"""
+
+import inspect
+
+import numpy as np
+
+
+class Detector:
+    def __init__(self,nRes,readoutNoise=0,photonNoise=0,QE=1):
+        self.resolution=nRes
+        self.QE=1
+        self.readoutNoise=readoutNoise
+        self.photonNoise=photonNoise        
+        self.frame=np.zeros([nRes,nRes])
+        self.tag='detector'        
+
+    def rebin(self,arr, new_shape):
+        shape = (new_shape[0], arr.shape[0] // new_shape[0],
+                 new_shape[1], arr.shape[1] // new_shape[1])        
+        out = (arr.reshape(shape).mean(-1).mean(1)) * (arr.shape[0] // new_shape[0]) * (arr.shape[1] // new_shape[1])        
+        return out
+
+# %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% END %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% 
+
+    def show(self):
+        attributes = inspect.getmembers(self, lambda a:not(inspect.isroutine(a)))
+        print(self.tag+':')
+        for a in attributes:
+            if not(a[0].startswith('__') and a[0].endswith('__')):
+                if not(a[0].startswith('_')):
+                    if not np.shape(a[1]):
+                        tmp=a[1]
+                        try:
+                            print('          '+str(a[0])+': '+str(tmp.tag)+' object') 
+                        except:
+                            print('          '+str(a[0])+': '+str(a[1])) 
+                    else:
+                        if np.ndim(a[1])>1:
                             print('          '+str(a[0])+': '+str(np.shape(a[1])))  

AO_modules/closed_loop/__init__.py → OOPAO/M4_model/__init__.py

@@ -1,7 +1,6 @@
-# -*- coding: utf-8 -*-
-"""
-Created on Fri Apr  3 10:56:59 2020
-
-@author: cheritie
-"""
-
+# -*- coding: utf-8 -*-
+"""
+Created on Fri Apr  3 10:56:59 2020
+
+@author: cheritie
+"""