3dUnifize

[birajstha]

Tested with the CPAC generate command

def afni_3dUnifize(cl_frac, rbt, input_image):
    """
    3dUnifize -clfrac 0.2 
    -rbt 18.3 65.0 90.0 
    -prefix uni.nii.gz 
    -T2 
    -input /ocean/projects/med220004p/bshresth/projects/rbc-runs/output2/working/pipeline_RBCv0/cpac_pipeline_RBCv0_sub-PA001_ses-V1W1/_scan_REST_run-1/unifize_104/ref_bold_corrected_brain_masked.nii.gz
    """
    out = afni.v_3d_unifize(cl_frac=cl_frac, rbt=rbt, prefix="desc-uni.nii.gz", t2=True, in_file=input_image)
    return out