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1. EBI-Metagenomics/amplicon-pipeline EBI-Metagenomics/amplicon-pipeline Public

   Nextflow 6 1

2. EBI-Metagenomics/nf-modules EBI-Metagenomics/nf-modules Public

   Microbiome Informatics NF modules and subworkflows

   JavaScript 5 1

3. EBI-Metagenomics/mgnify-pipelines-toolkit EBI-Metagenomics/mgnify-pipelines-toolkit Public

   This Python package contains a collection of scripts and tools for including in MGnify pipelines

   Python 2

4. EBI-Metagenomics/PIMENTO EBI-Metagenomics/PIMENTO Public

   A PrIMEr infereNce TOolkit to facilitate large-scale calling of metabarcoding amplicon sequence variants

   Python