Stable Millstone corresponding to Genome Biology publication

Publication:
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-017-1223-1

Latest AWS AMI was built just prior to this release and has been tested extensively:
millstone_combined_2016_11_14_b7ec4874299de63377eb80e43b7fdc1e5cc4e558

An AMI with the dependency updates made for this release is being tested.

Stable Millstone before next testing sprint

Fix #426: Added "Clear cache" button to Analyze view.

This forces recomputing the materialized view.

Initial beta release

This is the first release of Millstone used in the initial Amazon AMI that we cut. This release includes the full end-to-end user flow, including alignment and SNV-calling using Freebayes.

One notable pieces that we've disabled in this release until further testing is SV calling.