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A human genome browser to explore functionally annotated transcriptional consensus regulatory elements

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Genome Browser in shiny for CONREL;

Webpage of the project at bcglab.cibio.unitn.it/conrel/. The Genome Browser is containerized in a Singularity image - download of the image is available at the webserver. All the data are available inside the singularity image. The genome browser is implemented using a slightly modified version of the "Interactive visulizations for track-based genomic data in R" implemented by Marlin-Na/TnT and available at ddalfovo/TnT

Changelog

v2 - Working in progress

  • Improved UI: changed the genome/assembly selection mode
  • Added mouse mm10
  • splitted download files into singularity image and data (to choose between desired organism/assembly). Changed the local singularity installation method

v1.1

  • Added hg38 version and download data
  • Fixed bugs
  • Improved UI

v1.0

  • Implementation of the genome browser

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A human genome browser to explore functionally annotated transcriptional consensus regulatory elements

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