ngsjs v0.1.6

New scripts:

• bin/rbin

New features:

• prettify command line default ouput.
• add subcommands description in ./bin/ngsjs
• support bin/rbin to collect R packages bin files

Minor bug fix:

• fix rdownload not work

ngsjs v0.1.5

New scripts:

./bin/rtime_stamp
./bin/ranystr ./bin/rdownload`

New features:

• support rmv only input the extra params
• add R package ./src/ngsjs to resolve the R dependence and reduce the redundant R codes
• add configr::fetch.config in ./bin/rconfig
• add a complete set of RNA splcing analysis pipeline
• './bin/rtime_stamp' support to generate time stamp
• ./bin/ranstr support to generate random strings
• ./bin/rdownload support to parallel download urls
• ngsjs --list-all-subcmds return all sub-commands split by space

Test related:

• add ./scripts/test/start_cli_test to test the command line tools default output

Minor bug fix:

• rename ./bin/ngstk subcomd rcolors to rclrs
• add rmv in package.json test

ngsjs v0.1.4

New scripts:

• bin/rclrs
• bin/rmv

New features:

• Support ngstk::format_filenames to format filenames [prefix, suffix, replace, toupper, tolower].

ngsjs v0.1.3

New scripts:

• bin/ngsjs
• bin/rconfig

New features:

• Support use the bin/ngsjs to run subcmds
• Support configr to parse the configuration files with the custom R functions

ngsjs v0.1.2

New scripts:

• bin/rdeps
• bin/rsession
• bin/rbashful
• bin/rinstall

New features:

• Support automatically install ngsjs scripts required R packages
• Support sessionInfo() and sessioninfo::session_info() in bin/rsession
• Support bashful to style and parallelize the bash commands using bin/rbashful
• Support devtools, BiocManager, BioInstaller and pacman R packages (pkgs, repo, name) in bin/rinstall