test: add retries to some e2e tests that are flaky in Windows

[petebacondarwin]

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---

[email protected] includes the following runtime dependencies:

Package	Constraint	Resolved
miniflare	workspace:*	3.20240605.0
workerd	1.20240610.1	1.20240610.1
workerd --version	1.20240610.1	2024-06-10

Please ensure constraints are pinned, and miniflare/workerd minor versions match.

[petebacondarwin]

Hmm so retries didn't seem to help the Windows flakes