referenceevaluation.md

a reference evaluation was done using the vitis vinifera genome and the code is given below:

for i in $(grep href index.html | cut -f 4 -d "/" | cut -f 2 -d "=" | cut -f 1 -d ">");
        do echo wget https://ftp.ensemblgenomes.ebi.ac.uk/pub/plants/release-58/fasta/vitis_vinifera/dna/$i;
 done | sed "s/\"/g"                                                                                                                                                                                                                                                                                                                                                                    
wget https://ftp.ensemblgenomes.ebi.ac.uk/pub/plants/release-58/fasta/vitis_vinifera/dna/Vitis_vinifera.PN40024.v4.dna.chromosome.1.fa.gz

The corresponding files are located with in the repository and the links to the same are given below:

[Vitis peptide files]
(https://github.com/sablokgaurav/genomeassembly_standards/blob/main/Vitis_vinifera.PN40024.v4.pep.all.fa.gz)
[Vitis Genome file]
(https://ftp.ensemblgenomes.ebi.ac.uk/pub/plants/release-58/fasta/vitis_vinifera/dna/Vitis_vinifera.PN40024.v4.dna.chromosome.1.fa.gz)