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if a cell type completely disappears in a perturbation, hooke misses it/calls the cell type 'no change' in abundance #15

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eliza-barkan opened this issue Jan 11, 2023 · 0 comments
Open

if a cell type completely disappears in a perturbation, hooke misses it/calls the cell type 'no change' in abundance #15

eliza-barkan opened this issue Jan 11, 2023 · 0 comments

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@eliza-barkan
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When I plot abundance changes and a cell type completely disappears, it appears as "no change" instead of being colored dark blue, if this happens and there are too few cells for hooke to be confident calling a fold change, could they appear or be labeled differently than "no change"?
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@eliza-barkan