xiNET cross-link viewer

A web based visualisation of cross-link / mass spectrometry data developed by the Rappsilber Laboratory. It can be used at http://crosslinkviewer.org.

If you use xiNET in your work please cite:

Combe, Colin W., Lutz Fischer, and Juri Rappsilber. “xiNET: Cross-Link Network Maps With Residue Resolution.” Molecular & Cellular Proteomics : MCP 14, no. 4 (April 2015): 1137–47. https://doi.org/10.1074/mcp.O114.042259.

The uniprot DAS service is no longer used for looking up sequences and uniprot annoataions. The text based web service at http://www.uniprot.org/uniprot/ is used instead. As a consequence, it can now retreive sequences for isoforms (which were missing from the DAS service).

Rappsilber Laboratory is funded by the Wellcome Trust.

This branch uses MySQL instead of Postgres backend.