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@compbio-UofT

Computational Biology Lab at the University of Toronto

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  1. medsavant medsavant Public archive

    MedSavant is a search engine for genetic variants

    Java 22 9

  2. savant savant Public archive

    Savant is a next-generation genome browser designed for the latest generation of genome data

    Java 12 4

  3. shrimp shrimp Public

    SHRiMP is a software package for aligning genomic reads against a target genome.

    C 8 6

  4. fCNV fCNV Public

    a probabilistic method for non-invasive analysis of de novo CNVs in fetal genome based on maternal plasma sequencing

    Python 5 1

  5. alu-detect alu-detect Public

    aludetect

    C++ 4 1

  6. FSDA FSDA Public

    Python 4 2

Repositories

Showing 10 of 18 repositories
  • mrspec Public

    A database query and visualization engine for magnetic resonance spectroscopy data collected from a clinical cohort at SickKids hospital.

    compbio-UofT/mrspec’s past year of commit activity
    JavaScript 2 0 0 0 Updated Apr 7, 2019
  • FSDA Public
    compbio-UofT/FSDA’s past year of commit activity
    Python 4 2 0 0 Updated Dec 3, 2017
  • CouGaR-viz Public Forked from misko/CouGaR-viz
    compbio-UofT/CouGaR-viz’s past year of commit activity
    Racket 3 3 0 0 Updated May 18, 2016
  • CouGaR Public Forked from misko/minichr

    Mini Chromosome

    compbio-UofT/CouGaR’s past year of commit activity
    C++ 2 3 0 0 Updated May 13, 2016
  • shrimp Public

    SHRiMP is a software package for aligning genomic reads against a target genome.

    compbio-UofT/shrimp’s past year of commit activity
    C 8 6 1 0 Updated May 2, 2016
  • alu-detect Public

    aludetect

    compbio-UofT/alu-detect’s past year of commit activity
    C++ 4 1 0 0 Updated May 2, 2016
  • medsavant Public archive

    MedSavant is a search engine for genetic variants

    compbio-UofT/medsavant’s past year of commit activity
    Java 22 9 124 1 Updated Apr 21, 2016
  • savant Public archive

    Savant is a next-generation genome browser designed for the latest generation of genome data

    compbio-UofT/savant’s past year of commit activity
    Java 12 4 8 0 Updated Apr 21, 2016
  • silva Public Forked from buske/silva

    SilVA: Silent Variant Analysis using random forests

    compbio-UofT/silva’s past year of commit activity
    Python 0 GPL-3.0 5 0 0 Updated Oct 22, 2014
  • pathways-app Public archive

    Pathways app for MedSavant

    compbio-UofT/pathways-app’s past year of commit activity
    Java 0 LGPL-3.0 0 0 0 Updated Sep 15, 2014
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