Code

Upstream dev with master#799

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Merged

anwai98 merged 20 commits intodevcomputational-cell-analytics/micro-sam:devfrom mastercomputational-cell-analytics/micro-sam:masterCopy head branch name to clipboardNov 25, 2024

+1,002-587

Commits

Commits on Oct 20, 2024

• Minor updates to workshop documents (#752)

  Show description for aebb23e
  anwai98

  authored
  aebb23e

• Minor updates to finetuning notebook (#753)

  Show description for 6766019
  anwai98

  authored
  6766019

Commits on Oct 21, 2024

• Updates for the workshop (#755)

  Show description for 433bd6a
  

  constantinpape

  and

  anwai98

  authored
  433bd6a

Commits on Oct 24, 2024

• Add release overview to doc (#757)

  anwai98

  authored
  4df5a7b

• Add suggestion to transfer downloaded checkpoints and rename filenames (#758)

  Show description for 545af4f
  anwai98

  authored
  545af4f

• Add latest release overview to doc (#761)

  anwai98

  authored
  3cc956d

Commits on Oct 27, 2024

• Fix training UI (#763)

  Show description for eeedf68
  anwai98

  authored
  eeedf68

• Update workshop (#764)

  Show description for 13ecbb5
  constantinpape

  authored
  13ecbb5

Commits on Oct 29, 2024

• Fix automatic segmentation cli - check tile shape and return expected segmenter (#767)

  anwai98

  authored
  b9f3f87

Commits on Nov 12, 2024

• Remove merge conflict artifacts (#774)

  anwai98

  authored
  71bf568

Commits on Nov 13, 2024

• Minor fixes to automatic segmentation notebook (#779)

  Show description for 10525ad
  

  anwai98

  and

  Parsa744

  authored
  10525ad

Commits on Nov 14, 2024

• Add documentation for micro-sam CLIs (#777)

  anwai98

  authored
  9b055c3

• Minor fix to casting masks in AMG post-processing (#780)

  Show description for 031dae1
  anwai98

  authored
  031dae1

Commits on Nov 15, 2024

• Add example script for automatic segmentation (#781)

  anwai98

  authored
  962e34d

Commits on Nov 18, 2024

• Minor update to avoid caching embeddings in evaluation (#782)

  anwai98

  authored
  bb548f9

Commits on Nov 20, 2024

• Fix choice of automatic segmentation mode in CLI (#788)

  Show description for 41de117
  anwai98

  authored
  41de117

• Ensure segmentation data type after connected components (#783)

  anwai98

  authored
  1ef4777

Commits on Nov 22, 2024

• Minor fix to finetuning ui tooltip (#795)

  anwai98

  authored
  7591c6a

Commits on Nov 23, 2024

• Add tooltip mentions in FAQ section (#796)

  anwai98

  authored
  2898995

• Minor update to path for storing iterative prompting results (#797)

  anwai98

  authored
  e22eb18