Merge branch 'main' of github.com:courtois-neuromod/cneuromax #624
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| name: On push workflows requiring the CNeuroMax image | |
| on: | |
| push: | |
| branches: [main] | |
| jobs: | |
| docker-build: | |
| runs-on: self-hosted | |
| steps: | |
| - name: Checkout the GitHub repo | |
| uses: actions/checkout@v4 | |
| - name: Build the tentative CNeuroMax Docker image | |
| run: docker build -t cneuromod/cneuromax:latest . | |
| docker-push: | |
| needs: docker-build | |
| runs-on: self-hosted | |
| steps: | |
| - name: Push the tentative CNeuroMax Docker image | |
| run: docker push cneuromod/cneuromax:latest | |
| sphinx-build: | |
| needs: docker-build | |
| runs-on: self-hosted | |
| steps: | |
| - name: Checkout the GitHub repo | |
| uses: actions/checkout@v4 | |
| - name: Build the documentation with Sphinx | |
| run: > | |
| docker run --rm -v ${PWD}:${PWD} -w ${PWD} cneuromod/cneuromax:latest | |
| sphinx-build -b html ./docs/ ./docs/build/ | |
| - name: Deploy the documentation | |
| uses: peaceiris/actions-gh-pages@v4 | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| publish_dir: ./docs/build/ | |
| - name: Cleanup | |
| run: > | |
| find ${HOME} -name "actions_github_pages_*" -exec rm -rf {} + | |
| mypy: | |
| needs: docker-build | |
| runs-on: self-hosted | |
| steps: | |
| - name: Checkout the GitHub repo | |
| uses: actions/checkout@v4 | |
| - name: Static type checking with Mypy | |
| run: > | |
| docker run --rm -v ${PWD}:${PWD} -w ${PWD} cneuromod/cneuromax:latest | |
| mypy --config-file=pyproject.toml cneuromax | |
| pytest: | |
| needs: docker-build | |
| runs-on: self-hosted | |
| steps: | |
| - name: Checkout the GitHub repo | |
| uses: actions/checkout@v4 | |
| - name: Unit testing with pytest | |
| run: > | |
| docker run --rm -v ${PWD}:${PWD} -w ${PWD} cneuromod/cneuromax:latest | |
| pytest --cov cneuromax | |
| apptainer-build: | |
| needs: docker-push | |
| runs-on: self-hosted | |
| env: | |
| APPTAINER_CACHEDIR: /scratch/cneuromax/.apptainer/ | |
| steps: | |
| - name: Build the CNeuroMax Apptainer Image | |
| run: > | |
| apptainer build -F /scratch/cneuromax/cneuromax.sif | |
| docker://cneuromod/cneuromax:latest | |
| - name: Give permissions to the CNeuroMax Apptainer Image | |
| run: > | |
| chmod a+rwx /scratch/cneuromax/cneuromax.sif |