Update dependency nilearn to v0.11.1 #1081
Workflow file for this run
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| name: On pull request workflows requiring the CNeuroMax image | |
| on: | |
| pull_request: | |
| branches: [main] | |
| jobs: | |
| docker-build: | |
| runs-on: self-hosted | |
| steps: | |
| - name: Checkout the GitHub repo | |
| uses: actions/checkout@v4 | |
| - name: Build the tentative CNeuroMax Docker image | |
| run: docker build -t cneuromod/cneuromax:test . | |
| sphinx-build: | |
| needs: docker-build | |
| runs-on: self-hosted | |
| steps: | |
| - name: Checkout the GitHub repo | |
| uses: actions/checkout@v4 | |
| - name: Build the documentation with Sphinx | |
| run: > | |
| docker run --rm -v ${PWD}:${PWD} -w ${PWD} cneuromod/cneuromax:test | |
| sphinx-build -b html ./docs/ ./docs/build/ | |
| mypy: | |
| needs: docker-build | |
| runs-on: self-hosted | |
| steps: | |
| - name: Checkout the GitHub repo | |
| uses: actions/checkout@v4 | |
| - name: Static type checking with Mypy | |
| run: > | |
| docker run --rm -v ${PWD}:${PWD} -w ${PWD} cneuromod/cneuromax:test | |
| mypy --config-file=pyproject.toml cneuromax | |
| pytest: | |
| needs: docker-build | |
| runs-on: self-hosted | |
| steps: | |
| - name: Checkout the GitHub repo | |
| uses: actions/checkout@v4 | |
| - name: Unit testing with pytest | |
| run: > | |
| docker run --rm -v ${PWD}:${PWD} -w ${PWD} cneuromod/cneuromax:test | |
| pytest --cov cneuromax | |
| classify_mnist-mlp_cpu: | |
| needs: docker-build | |
| runs-on: self-hosted | |
| steps: | |
| - name: Checkout the GitHub repo | |
| uses: actions/checkout@v4 | |
| - name: Create WANDB_KEY.txt file | |
| run: echo ${{ secrets.WANDB_KEY_MLC }} > ${PWD}/WANDB_KEY.txt | |
| - name: Runs project=classify_mnist task=mlp_cpu | |
| run: > | |
| docker run --privileged --gpus all --rm -e CNEUROMAX_PATH=${PWD} | |
| -v ${PWD}:${PWD} -e PYTHONPATH=${PYTHONPATH}:${PWD} | |
| -v /dev/shm:/dev/shm -w ${PWD} cneuromod/cneuromax:test | |
| python3 -m cneuromax project=classify_mnist task=mlp_cpu | |
| logger.entity=maximilienlc | |
| classify_mnist-mlp: | |
| needs: docker-build | |
| runs-on: self-hosted | |
| steps: | |
| - name: Checkout the GitHub repo | |
| uses: actions/checkout@v4 | |
| - name: Create WANDB_KEY.txt file | |
| run: echo ${{ secrets.WANDB_KEY_MLC }} > ${PWD}/WANDB_KEY.txt | |
| - name: Runs project=classify_mnist task=mlp | |
| run: > | |
| docker run --privileged --gpus all --rm -e CNEUROMAX_PATH=${PWD} | |
| -v ${PWD}:${PWD} -e PYTHONPATH=${PYTHONPATH}:${PWD} | |
| -v /dev/shm:/dev/shm -w ${PWD} cneuromod/cneuromax:test | |
| python3 -m cneuromax project=classify_mnist task=mlp | |
| logger.entity=maximilienlc litmodule.config.log_val_wandb=True | |
| neuroevorl_control-acrobot: | |
| needs: docker-build | |
| runs-on: self-hosted | |
| steps: | |
| - name: Checkout the GitHub repo | |
| uses: actions/checkout@v4 | |
| - name: Create WANDB_KEY.txt file | |
| run: echo ${{ secrets.WANDB_KEY_MLC }} > ${PWD}/WANDB_KEY.txt | |
| - name: Runs project=neuroevorl_control task=acrobot | |
| run: > | |
| docker run --privileged --gpus all --rm -e CNEUROMAX_PATH=${PWD} | |
| -v ${PWD}:${PWD} -e PYTHONPATH=${PYTHONPATH}:${PWD} | |
| -v /dev/shm:/dev/shm -w ${PWD} cneuromod/cneuromax:test | |
| python3 -m cneuromax project=neuroevorl_control task=acrobot | |
| logger.entity=maximilienlc config.total_num_gens=10 |