Collect Issue-Milestones #421
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Collect Issue-Milestones | |
| on: | |
| workflow_dispatch: | |
| schedule: | |
| - cron: '0 3 * * *' | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| SCRIPT_NAME: Issue Milestone Collector | |
| SCRIPT_DIR: scripts/issue-milestone-collector | |
| ALIAS_MAPPING_JSON: pango_designation/alias_key.json | |
| DATA_DIR: data | |
| STREAM_NAME: github-api-milestones | |
| STREAM_DIR: github-artifacts/api-payload | |
| MAPPING_NAME: mappings | |
| MAPPING_DIR: github-artifacts/mappings | |
| COMMIT_MESSAGE: Update via Issue Milestone Collector | |
| COMMIT_AUTHOR: Issue Milestone Collector | |
| COMMIT_AUTHOR_EMAIL: "[email protected]" | |
| concurrency: | |
| group: single-workflow | |
| cancel-in-progress: true | |
| jobs: | |
| script-setup: | |
| name: Script Setup | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 1 | |
| ref: master | |
| - name: Create Initial Artifact Files | |
| run: | | |
| mkdir -p -v $SCRIPT_DIR/$STREAM_DIR $SCRIPT_DIR/$MAPPING_DIR | |
| touch $SCRIPT_DIR/{$STREAM_DIR,$MAPPING_DIR}/{cov-lineages_pango-designation,sars-cov-2-variants_lineage-proposals}.json | |
| - name: Upload Stream Artifacts | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: ${{ env.STREAM_NAME }} | |
| path: ${{ env.SCRIPT_DIR }}/${{ env.STREAM_DIR }} | |
| - name: Upload Mapping Artifacts | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: ${{ env.MAPPING_NAME }} | |
| path: ${{ env.SCRIPT_DIR }}/${{ env.MAPPING_DIR }} | |
| github-api-request: | |
| name: GitHub API Request | |
| runs-on: ubuntu-latest | |
| needs: script-setup | |
| concurrency: graphql | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| owner: [cov-lineages, sars-cov-2-variants] | |
| include: | |
| - repository: pango-designation | |
| owner: cov-lineages | |
| - repository: lineage-proposals | |
| owner: sars-cov-2-variants | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 1 | |
| ref: master | |
| - name: Ensure Directory Structure | |
| run: | | |
| mkdir -p -v $SCRIPT_DIR/$STREAM_DIR $SCRIPT_DIR/$MAPPING_DIR | |
| - name: Download Stream Artifacts | |
| uses: actions/[email protected] | |
| with: | |
| name: ${{ env.STREAM_NAME }} | |
| path: ${{ env.SCRIPT_DIR }}/${{ env.STREAM_DIR }} | |
| - name: Download Mappings Artifacts | |
| uses: actions/[email protected] | |
| with: | |
| name: ${{ env.MAPPING_NAME }} | |
| path: ${{ env.SCRIPT_DIR }}/${{ env.MAPPING_DIR }} | |
| - name: GitHub CLI GraphQL Request | |
| run: | | |
| cd $SCRIPT_DIR/$STREAM_DIR | |
| gh api graphql \ | |
| --paginate \ | |
| --cache "1h" \ | |
| --header "Accept: application/vnd.github+json" \ | |
| --header "X-GitHub-Api-Version: 2022-11-28" \ | |
| --field owner=${{ matrix.owner }} \ | |
| --field repository=${{ matrix.repository }} \ | |
| --raw-field query=' | |
| query($owner: String!, $repository: String!, $endCursor: String) { | |
| repository(owner: $owner, name: $repository) { | |
| nameWithOwner | |
| milestones(first:100, after: $endCursor) { | |
| pageInfo { | |
| hasNextPage | |
| endCursor | |
| } | |
| nodes { | |
| number | |
| title | |
| progressPercentage | |
| issues(first: 10) { | |
| nodes { | |
| number, | |
| labels(first: 10) { | |
| nodes { | |
| name | |
| } | |
| }, | |
| state, | |
| stateReason | |
| } | |
| } | |
| } | |
| } | |
| } | |
| }' | jq ' | |
| if (. | has("errors")) | |
| then error("GitHub API Error: \(.errors)") | |
| else . end' \ | |
| > ${{ matrix.owner }}_${{ matrix.repository }}.json | |
| echo "Request Finished" | |
| - name: Post-process JSON Stream | |
| run: | | |
| # https://jqplay.org/s/UXZ31kBi_UE All | |
| # https://jqplay.org/s/p1WYXibKnyy Lookup Test | |
| jq --null-input \ | |
| 'def lookup(KEY): | |
| .[KEY] // error("MAPPING ERROR: \(KEY) does not exist within the mapper\nMAPPER:\n\(.)"); | |
| [input | to_entries[] | if (.key == "A" or .key == "B" or (.key | startswith("X"))) then .value = .key else . end] | |
| | sort_by(.key) | from_entries as $mapper | | |
| [inputs | .data.repository | |
| | .nameWithOwner as $repo | |
| | .milestones.nodes | |
| | map(select( | |
| ((.progressPercentage == 100) or ((.progressPercentage != 100) and (.issues.nodes[].labels.nodes[].name | contains("designated")))) | |
| and (.title | contains("withdrawn") | not) | |
| and (.issues.nodes[])) | |
| | (.title | splits(",? +|,")) as $pango | |
| | { | |
| ($pango | sub("^[A-Z]+"; $mapper | lookup($pango | split(".")[0]))): | |
| [ {pango: $pango} | |
| + { $repo, milestone: .number } | |
| + (.issues.nodes[] | | |
| { issue: .number, labels: ([.labels.nodes[].name] | join(", ")), state: .state, reason: .stateReason }) | |
| ] | |
| } | |
| ) | add | |
| ] | add ' \ | |
| $ALIAS_MAPPING_JSON $SCRIPT_DIR/$STREAM_DIR/${{ matrix.owner }}_${{ matrix.repository }}.json \ | |
| > $SCRIPT_DIR/$MAPPING_DIR/${{ matrix.owner }}_${{ matrix.repository }}.json | |
| echo "Request Finished" | |
| - name: Upload Stream Artifacts | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: ${{ env.STREAM_NAME }} | |
| path: ${{ env.SCRIPT_DIR }}/${{ env.STREAM_DIR }} | |
| - name: Upload Mapping Artifacts | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: ${{ env.MAPPING_NAME }} | |
| path: ${{ env.SCRIPT_DIR }}/${{ env.MAPPING_DIR }} | |
| merge-mappings: | |
| runs-on: ubuntu-latest | |
| needs: github-api-request | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 1 | |
| ref: master | |
| - name: Ensure Directory Structure | |
| run: | | |
| mkdir -p -v $SCRIPT_DIR/$STREAM_DIR $SCRIPT_DIR/$MAPPING_DIR $SCRIPT_DIR/$DATA_DIR | |
| # - name: Download Stream Artifacts | |
| # uses: actions/[email protected] | |
| # with: | |
| # name: ${{ env.STREAM_NAME }} | |
| # path: ${{ env.SCRIPT_DIR }}/${{ env.STREAM_DIR }} | |
| - name: Download Mapping Artifacts | |
| uses: actions/[email protected] | |
| with: | |
| name: ${{ env.MAPPING_NAME }} | |
| path: ${{ env.SCRIPT_DIR }}/${{ env.MAPPING_DIR }} | |
| - name: Post-process JSON Mappings | |
| run: | | |
| cd $SCRIPT_DIR | |
| # https://jqplay.org/s/hMplWeL4VC5 | |
| jq --null-input \ | |
| '[inputs | to_entries | sort] | add | |
| | map(.value[] + {"unaliased": .key}) | |
| | group_by(.unaliased) | add | unique | sort_by(.repo, .issue) | |
| | group_by(.unaliased) | |
| | map({(.[].unaliased) : [.[]]}) | add' \ | |
| $MAPPING_DIR/*.json \ | |
| > $DATA_DIR/mappings.json | |
| - name: Create TSV | |
| run: | | |
| cd $SCRIPT_DIR | |
| # https://jqplay.org/s/wZi2JJnFp-i | |
| jq --null-input --raw-output \ | |
| '[inputs | to_entries] | add | sort | |
| | map(.value[]) | |
| | [.[] | with_entries( .key |= ascii_upcase ) ] | |
| | (.[0] | keys_unsorted | @tsv), (.[] | . | map(.) | @tsv)' \ | |
| $DATA_DIR/mappings.json \ | |
| > $DATA_DIR/mappings.tsv | |
| - name: Update README.md | |
| run: | | |
| cd $SCRIPT_DIR | |
| # https://jqplay.org/s/yamLR8O_qfT | |
| # https://jqplay.org/s/JSwD4q_mlLI With unaliased | |
| # https://jqplay.org/s/vk554kUteJ4 Functions Test | |
| markdown_table=$(jq --null-input --raw-output \ | |
| 'def chunk(N): | |
| if . | length <= N | |
| then [.] | |
| else ([.[0:N]] + (.[N:] | chunk(N))) | |
| end; | |
| def split_hierarchy(N): | |
| . | split(".") as $split | |
| | $split[0] as $base | |
| | $split[1:] as $hierarchy | |
| | [$base] + if ($split | length > 1) then ([$hierarchy | chunk(N) | map(join(".")) | join(" .")]) else [] end | join("."); | |
| [inputs | to_entries] | add | sort | |
| | map(.value[] + {"lineage": (.key)}) | |
| | map_values(.repo as $repo | . | |
| + {"pango": ("`" + .pango + "`")} | |
| + {"unaliased_split": ("`" + (.unaliased | split_hierarchy(9)) + "`")} | |
| + {"source": (if $repo == "cov-lineages/pango-designation" then "main" else "2nd" end)} | |
| + {"labels": .labels | split(", ") | | |
| (if $repo == "cov-lineages/pango-designation" | |
| then map("https://github.com/\($repo)/labels/\(. | @uri | gsub("\\."; "%2E"))") | join(" ") | |
| else map("[\(.)](https://github.com/\($repo)/labels/\(. | @uri | gsub("\\."; "%2E")))") | join(", ") | |
| end) | |
| } | |
| + {"milestone": ("[⚑ \(.milestone)](https://github.com/\($repo)/milestone/\(.milestone)?closed=1)")} | |
| + {"issue": ("[#\(.issue)\(if .reason == "REOPENED" then " 🔵" elif (.reason | not) then " 🟠" elif .reason == "NOT_PLANNED" then " 🔴" else "" end)](https://github.com/\($repo)/issues/\(.issue))")} | |
| ) as $data | |
| | [["PANGO", "UNALIASED PANGO", "MILESTONE", "ISSUE", "LABELS", "REPO"] | join(" | ")] | |
| + [[":---", ":---", ":---:", ":---:", ":---", ":--"] | join(" | ")] | |
| + ($data | map(.pango + " | " + .unaliased_split + " | " + .milestone + " | " + .issue + " | " + .labels + " | " + .source)) | .[]' \ | |
| $DATA_DIR/mappings.json) | |
| echo -e "$markdown_table" > README.md | |
| - name: Commit and Push | |
| run: | | |
| gitStatus=$(git status --porcelain) | |
| # Check if empty | |
| if [ -z "$gitStatus" ]; then | |
| echo "No changes to commit" | |
| else | |
| echo "Changes detected:" | |
| echo "$gitStatus" | |
| echo | |
| echo "committing..." | |
| git config user.name "$COMMIT_AUTHOR" | |
| git config user.email "$COMMIT_AUTHOR_EMAIL" | |
| git add --all | |
| git commit -a -m "$COMMIT_MESSAGE" | |
| git push | |
| fi | |