Update lineage_notes.txt

cov-lineages · Aug 21, 2024 · 708a9e9 · 708a9e9
1 parent 340273e
commit 708a9e9
Showing 1 changed file with 9 additions and 9 deletions.
diff --git a/lineage_notes.txt b/lineage_notes.txt
@@ -1145,7 +1145,7 @@ LB.1.7.1	Alias of B.1.1.529.2.86.1.1.9.2.1.7.1, S:N148T, USA-NY
 LB.1.7.2	Alias of B.1.1.529.2.86.1.1.9.2.1.7.2, S:S680P
 LB.1.7.3	Alias of B.1.1.529.2.86.1.1.9.2.1.7.3, S:R34C
 LB.1.8	Alias of B.1.1.529.2.86.1.1.9.2.1.8, ORF1a:I785V
-LB.1.9	Alias of B.1.1.529.2.86.1.1.9.2.1.9, S:K478T (reversion), G20931T, T29194C, C15960T, India
+LB.1.9	Alias of B.1.1.529.2.86.1.1.9.2.1.9, S:K478T (reversion), G20931T, T29194C, C15960T, India，from  sars-cov-2-variants/lineage-proposals#1874
 JN.1.10	Alias of B.1.1.529.2.86.1.1.10, S:T95I, USA/Canada, from sars-cov-2-variants/lineage-proposals#1135
 JN.1.11	Alias of B.1.1.529.2.86.1.1.11, S:V1104L, G17334T, India, from #2446
 JN.1.11.1	Alias of B.1.1.529.2.86.1.1.11.1, S:F456L (T22928C), after ORF1a:T2283I, India, from sars-cov-2-variants/lineage-proposals#1253
@@ -1240,7 +1240,7 @@ KP.3.2.1	Alias of B.1.1.529.2.86.1.1.11.1.3.2.1, S:A263V, Australia/Singapore, f
 KP.3.2.2	Alias of B.1.1.529.2.86.1.1.11.1.3.2.2, S:W258R
 KP.3.2.3	Alias of B.1.1.529.2.86.1.1.11.1.3.2.3, ORF3a:S40P, C11518T
 LW.1	Alias of B.1.1.529.2.86.1.1.11.1.3.2.3.1, S:K182E, England
-LW.1.1	Alias of B.1.1.529.2.86.1.1.11.1.3.2.3.1.1, S:T33I
+LW.1.1	Alias of B.1.1.529.2.86.1.1.11.1.3.2.3.1.1, S:T33I，from  sars-cov-2-variants/lineage-proposals#1776
 LW.1.2	Alias of B.1.1.529.2.86.1.1.11.1.3.2.3.1.1, S:T22N
 KP.3.2.4	Alias of B.1.1.529.2.86.1.1.11.1.3.2.4, ORF3a:L73F
 KP.3.2.5	Alias of B.1.1.529.2.86.1.1.11.1.3.2.5, S:V62F, from sars-cov-2-variants/lineage-proposals#1604
@@ -1255,7 +1255,7 @@ MR.1	Alias of B.1.1.529.2.86.1.1.11.1.3.3.4.1, S:S31del, ORF1a:V1236I, from #270
 KP.3.4	Alias of B.1.1.529.2.86.1.1.11.1.3.4, ORF3a:L73F, C25521T, Asia
 KP.3.4.1	Alias of B.1.1.529.2.86.1.1.11.1.3.4.1, S:S31F, N:A134V, ORF1a:E1192K
 KP.3.5	Alias of B.1.1.529.2.86.1.1.11.1.3.5, S:G213E, most with C1420T, America
-KP.3.6	Alias of B.1.1.529.2.86.1.1.11.1.3.6, S:T22N, Canada
+KP.3.6	Alias of B.1.1.529.2.86.1.1.11.1.3.6, S:T22N, Canada，from  sars-cov-2-variants/lineage-proposals#1748
 KP.4	Alias of B.1.1.529.2.86.1.1.11.1.4, C6070T, India
 KP.4.1	Alias of B.1.1.529.2.86.1.1.11.1.4.1, S:R346T, C19884T, from sars-cov-2-variants/lineage-proposals#1089
 KP.4.1.1	Alias of B.1.1.529.2.86.1.1.11.1.4.1.1, S:W258R, India from #2521
@@ -1305,7 +1305,7 @@ LA.2	Alias of B.1.1.529.2.86.1.1.16.2.2, S:R346I, from sars-cov-2-variants/linea
 JN.1.16.3	Alias of B.1.1.529.2.86.1.1.16.3, S:T572I
 JN.1.16.4	Alias of B.1.1.529.2.86.1.1.16.4, S:Q493E, ORF1a:G400S, ORF7a:F59K, East Asia
 MT.1	Alias of B.1.1.529.2.86.1.1.16.4.1, S:S31P, N:P279S
-JN.1.16.5	Alias of B.1.1.529.2.86.1.1.16.5, S:T22N, S:Q493E
+JN.1.16.5	Alias of B.1.1.529.2.86.1.1.16.5, S:T22N, S:Q493E，from #2706
 JN.1.17	Alias of B.1.1.529.2.86.1.1.17, S:A222V, USA
 JN.1.18	Alias of B.1.1.529.2.86.1.1.18, S:R346T, directly on JN.1 polytomy, from sars-cov-2-variants/lineage-proposals#1089
 JN.1.18.1	Alias of B.1.1.529.2.86.1.1.18.1, S:T250N, from sars-cov-2-variants/lineage-proposals#1414
@@ -1449,8 +1449,8 @@ JN.1.65.1	Alias of B.1.1.529.2.86.1.1.65.1, S:F456L (22928C), A10420G, C5884T, C
 MF.1	Alias of B.1.1.529.2.86.1.1.65.1.1, S:R346T, T21673C, pre-22981T from #2461
 MF.2	Alias of B.1.1.529.2.86.1.1.65.1.2, S:S60P, S:W64L from #2461
 JN.1.66	Alias of B.1.1.529.2.86.1.1.66, S:H445P, S:F456L (T22930A), S:T1117I, ORF1a:L2146F, ORF3a:L106F, Iceland/Sweden
-JN.1.67	Alias of B.1.1.529.2.86.1.1.67, M:L46F
-JN.1.67.1	Alias of B.1.1.529.2.86.1.1.67.1, S:F456L, China
+JN.1.67	Alias of B.1.1.529.2.86.1.1.67, M:L46F，from #2531
+JN.1.67.1	Alias of B.1.1.529.2.86.1.1.67.1, S:F456L, China，from #2531
 JN.2	Alias of B.1.1.529.2.86.1.2, ORF1a:Y621C, Europe/North America, from #2284
 JN.2.1	Alias of B.1.1.529.2.86.1.2.1, S:S31F, Sweden/Australia
 JN.2.2	Alias of B.1.1.529.2.86.1.2.2, S:T572I, N:G25C, ORF1a:L3644F, Netherlands, from #2433
@@ -4220,14 +4220,14 @@ XDQ.2	S:N487D, Vietnam, from sars-cov-2-variants/lineage-proposals#1408
 XDQ.3	S:681H, Indonesia, from sars-cov-2-variants/lineage-proposals#1508
 XDR	Recombinant lineage of JD.1.1.1 and JN.1.1 (breakpoint between 11043 and 11726), Brazil, from #2477
 XDR.1	S:F59S, G6077T, A14031G, C26801T, Brazil/Peru, from sars-cov-2-variants/lineage-proposals#1542
-XDR.1.1	S:F456L, ORF1a:A2142V, ORF1b:A2480D, ORF8:E92K
+XDR.1.1	S:F456L, ORF1a:A2142V, ORF1b:A2480D, ORF8:E92K，from sars-cov-2-variants/lineage-proposals#1795
 XDR.1.2	ORF1a:L3754F, ORF1b:L1890F
 XDS	Recombinant lineage of EG.5.1.3, JN.3.2.1, EG.5.1.3 (breakpoints at 8294-8392 and 26834-27506), from sars-cov-2-variants/lineage-proposals#1267
 XDT	Recombinant lineage of BA.2.86.4, GK.1 (breakpoint between 23673-24378), Ireland/UK, from #2485
 XDU	Recombinant lineage of BA.2.86.1, XBB.1.16  (breakpoint between 11957-12729), Japan, from #2502
 XDV	Recombinant lineage of XDE, JN.1, XDE, JN.1 (breakpoints between 19327-21608, 27916-28296, 28959-29534), USA/China, from #2402
 XDV.1	S:F456L (T22930A), on C11572T branch, Hong Kong
-XDV.1.1	S:S60P, T4579A, T9208G, China
+XDV.1.1	S:S60P, T4579A, T9208G, China，from sars-cov-2-variants/lineage-proposals#1820
 XDV.1.2	S:R346T, N:I292T, ORF1a:L3116F, China
 XDV.1.2.1	S:K462R, ORF1a:L3829F
 XDV.1.3	S:T572I
@@ -4237,7 +4237,7 @@ XDV.1.6	S:K478T, S:A263T, ORF1a:V1783I, ORF1a:E1209D
 XDV.1.7	ORF1a:D2980N, C8950T, China
 XDV.1.8	T2551C, T9892G
 XDV.1.9	ORF1a:T2197I
-XDV.1.10	ORF1a:T4175I, S:G181V, China-Hubei
+XDV.1.10	ORF1a:T4175I, S:G181V, China-Hubei，from sars-cov-2-variants/lineage-proposals#1849
 XDV.1.11	T4057C
 XDW	Recombinant lineage of JN.2 (T1030C branch), XDA (breakpoint between 23424-23603), Japan, from sars-cov-2-variants/lineage-proposals#1471
 XDY	Recombinant lineage of LB.1.2.1 and KP.3.2 (breakpoint between 22131-22599), Sweden/Spain, from sars-cov-2-variants/lineage-proposals#1559