Update AST framework and tests #653

aravij · 2020-10-27T09:31:17Z

Main enchaincments:

Block statement graph
Fake AST nodes

acheshkov · 2020-11-03T06:49:21Z

@rultor merge

rultor · 2020-11-03T06:50:55Z

@rultor merge

@acheshkov OK, I'll try to merge now. You can check the progress of the merge here

rultor · 2020-11-03T06:56:30Z

@rultor merge

@acheshkov @aravij Oops, I failed. You can see the full log here (spent 5min)

Requirement already satisfied: plotly in /home/r/.local/lib/python3.6/site-packages (from catboost==0.22->aibolit==1.2.6rc2) (4.12.0)
Requirement already satisfied: graphviz in /home/r/.local/lib/python3.6/site-packages (from catboost==0.22->aibolit==1.2.6rc2) (0.14.2)
Requirement already satisfied: requests>=2.7.9 in /home/r/.local/lib/python3.6/site-packages (from codecov==2.0.15->aibolit==1.2.6rc2) (2.24.0)
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Requirement already satisfied: mccabe<0.7.0,>=0.6.0 in /home/r/.local/lib/python3.6/site-packages (from flake8==3.7.9->aibolit==1.2.6rc2) (0.6.1)
Requirement already satisfied: entrypoints<0.4.0,>=0.3.0 in /home/r/.local/lib/python3.6/site-packages (from flake8==3.7.9->aibolit==1.2.6rc2) (0.3)
Requirement already satisfied: pyflakes<2.2.0,>=2.1.0 in /home/r/.local/lib/python3.6/site-packages (from flake8==3.7.9->aibolit==1.2.6rc2) (2.1.1)
Requirement already satisfied: cycler>=0.10 in /home/r/.local/lib/python3.6/site-packages (from matplotlib==3.2.1->aibolit==1.2.6rc2) (0.10.0)
Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /home/r/.local/lib/python3.6/site-packages (from matplotlib==3.2.1->aibolit==1.2.6rc2) (2.4.7)
Requirement already satisfied: python-dateutil>=2.1 in /usr/lib/python3/dist-packages (from matplotlib==3.2.1->aibolit==1.2.6rc2) (2.6.1)
Requirement already satisfied: kiwisolver>=1.0.1 in /home/r/.local/lib/python3.6/site-packages (from matplotlib==3.2.1->aibolit==1.2.6rc2) (1.3.1)
Requirement already satisfied: mypy-extensions<0.5.0,>=0.4.3 in /home/r/.local/lib/python3.6/site-packages (from mypy==0.770->aibolit==1.2.6rc2) (0.4.3)
Requirement already satisfied: typed-ast<1.5.0,>=1.4.0 in /home/r/.local/lib/python3.6/site-packages (from mypy==0.770->aibolit==1.2.6rc2) (1.4.1)
Requirement already satisfied: decorator>=4.3.0 in /home/r/.local/lib/python3.6/site-packages (from networkx==2.4->aibolit==1.2.6rc2) (4.4.2)
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Requirement already satisfied: joblib>=0.11 in /home/r/.local/lib/python3.6/site-packages (from scikit-learn==0.23.2->aibolit==1.2.6rc2) (0.17.0)
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Requirement already satisfied: sphinxcontrib-applehelp in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (1.0.2)
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Requirement already satisfied: urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 in /usr/lib/python3/dist-packages (from requests>=2.7.9->codecov==2.0.15->aibolit==1.2.6rc2) (1.22)
Requirement already satisfied: MarkupSafe>=0.23 in /home/r/.local/lib/python3.6/site-packages (from Jinja2>=2.3->sphinx==2.3.1->aibolit==1.2.6rc2) (1.1.1)
Building wheels for collected packages: aibolit
  Building wheel for aibolit (setup.py) ... \u001b[?25l-\u0008 \u0008\\u0008 \u0008|\u0008 \u0008/\u0008 \u0008-\u0008 \u0008\\u0008 \u0008done
\u001b[?25h  Created wheel for aibolit: filename=aibolit-1.2.6rc2-py2.py3-none-any.whl size=12134779 sha256=ce1be1b3b770fbbbd7a27089ce7cd4e6a2fd5305b858c681cb7a90e328a7887d
  Stored in directory: /tmp/pip-ephem-wheel-cache-54if6z3t/wheels/6a/94/20/fb6515fe78e005049099e68caee81e4e2e53c92744d4ab767f
Successfully built aibolit
Installing collected packages: aibolit
\u001b[33m  WARNING: The script aibolit is installed in '/home/r/.local/bin' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.\u001b[0m
Successfully installed aibolit-1.2.6rc2
\u001b[33mWARNING: You are using pip version 20.0.2; however, version 20.2.4 is available.
You should consider upgrading via the '/usr/bin/python3 -m pip install --upgrade pip' command.\u001b[0m
python3 -m flake8 aibolit test scripts setup.py --exclude scripts/target/*
aibolit/ast_framework/ast_node.py:113:13: W503 line break before binary operator
aibolit/ast_framework/ast_node.py:114:13: W503 line break before binary operator
aibolit/ast_framework/ast_node.py:144:13: W503 line break before binary operator
aibolit/ast_framework/ast_node.py:145:13: W503 line break before binary operator
aibolit/ast_framework/ast_node.py:146:13: W503 line break before binary operator
Makefile:31: recipe for target 'flake8' failed
make: *** [flake8] Error 1
container daa1badfea75f61b997440f2fe8a6d66ff29f57094a912946c17a34bb72453f5 is dead
Tue Nov  3 07:56:18 CET 2020

aravij · 2020-11-03T08:10:46Z

@acheshkov, I fixed flake, please reaproove and merge one more time.

acheshkov · 2020-11-03T09:13:48Z

@rultor merge

rultor · 2020-11-03T09:14:07Z

@rultor merge

@acheshkov OK, I'll try to merge now. You can check the progress of the merge here

rultor · 2020-11-03T09:19:46Z

@rultor merge

@acheshkov @aravij Oops, I failed. You can see the full log here (spent 5min)

Requirement already satisfied: entrypoints<0.4.0,>=0.3.0 in /home/r/.local/lib/python3.6/site-packages (from flake8==3.7.9->aibolit==1.2.6rc2) (0.3)
Requirement already satisfied: mccabe<0.7.0,>=0.6.0 in /home/r/.local/lib/python3.6/site-packages (from flake8==3.7.9->aibolit==1.2.6rc2) (0.6.1)
Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /home/r/.local/lib/python3.6/site-packages (from matplotlib==3.2.1->aibolit==1.2.6rc2) (2.4.7)
Requirement already satisfied: cycler>=0.10 in /home/r/.local/lib/python3.6/site-packages (from matplotlib==3.2.1->aibolit==1.2.6rc2) (0.10.0)
Requirement already satisfied: kiwisolver>=1.0.1 in /home/r/.local/lib/python3.6/site-packages (from matplotlib==3.2.1->aibolit==1.2.6rc2) (1.3.1)
Requirement already satisfied: python-dateutil>=2.1 in /usr/lib/python3/dist-packages (from matplotlib==3.2.1->aibolit==1.2.6rc2) (2.6.1)
Requirement already satisfied: mypy-extensions<0.5.0,>=0.4.3 in /home/r/.local/lib/python3.6/site-packages (from mypy==0.770->aibolit==1.2.6rc2) (0.4.3)
Requirement already satisfied: typed-ast<1.5.0,>=1.4.0 in /home/r/.local/lib/python3.6/site-packages (from mypy==0.770->aibolit==1.2.6rc2) (1.4.1)
Requirement already satisfied: decorator>=4.3.0 in /home/r/.local/lib/python3.6/site-packages (from networkx==2.4->aibolit==1.2.6rc2) (4.4.2)
Requirement already satisfied: pytz>=2017.2 in /home/r/.local/lib/python3.6/site-packages (from pandas==1.0.0->aibolit==1.2.6rc2) (2020.4)
Requirement already satisfied: joblib>=0.11 in /home/r/.local/lib/python3.6/site-packages (from scikit-learn==0.23.2->aibolit==1.2.6rc2) (0.17.0)
Requirement already satisfied: threadpoolctl>=2.0.0 in /home/r/.local/lib/python3.6/site-packages (from scikit-learn==0.23.2->aibolit==1.2.6rc2) (2.1.0)
Requirement already satisfied: imagesize in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (1.2.0)
Requirement already satisfied: babel!=2.0,>=1.3 in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (2.8.0)
Requirement already satisfied: docutils>=0.12 in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (0.16)
Requirement already satisfied: sphinxcontrib-qthelp in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (1.0.3)
Requirement already satisfied: sphinxcontrib-jsmath in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (1.0.1)
Requirement already satisfied: sphinxcontrib-serializinghtml in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (1.1.4)
Requirement already satisfied: Jinja2>=2.3 in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (2.11.2)
Requirement already satisfied: sphinxcontrib-htmlhelp in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (1.0.3)
Requirement already satisfied: sphinxcontrib-applehelp in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (1.0.2)
Requirement already satisfied: setuptools in /usr/lib/python3/dist-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (39.0.1)
Requirement already satisfied: alabaster<0.8,>=0.7 in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (0.7.12)
Requirement already satisfied: Pygments>=2.0 in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (2.7.2)
Requirement already satisfied: packaging in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (20.4)
Requirement already satisfied: snowballstemmer>=1.1 in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (2.0.0)
Requirement already satisfied: sphinxcontrib-devhelp in /home/r/.local/lib/python3.6/site-packages (from sphinx==2.3.1->aibolit==1.2.6rc2) (1.0.2)
Requirement already satisfied: retrying>=1.3.3 in /home/r/.local/lib/python3.6/site-packages (from plotly->catboost==0.22->aibolit==1.2.6rc2) (1.3.3)
Requirement already satisfied: chardet<4,>=3.0.2 in /usr/lib/python3/dist-packages (from requests>=2.7.9->codecov==2.0.15->aibolit==1.2.6rc2) (3.0.4)
Requirement already satisfied: certifi>=2017.4.17 in /usr/lib/python3/dist-packages (from requests>=2.7.9->codecov==2.0.15->aibolit==1.2.6rc2) (2018.1.18)
Requirement already satisfied: idna<3,>=2.5 in /usr/lib/python3/dist-packages (from requests>=2.7.9->codecov==2.0.15->aibolit==1.2.6rc2) (2.6)
Requirement already satisfied: urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 in /usr/lib/python3/dist-packages (from requests>=2.7.9->codecov==2.0.15->aibolit==1.2.6rc2) (1.22)
Requirement already satisfied: MarkupSafe>=0.23 in /home/r/.local/lib/python3.6/site-packages (from Jinja2>=2.3->sphinx==2.3.1->aibolit==1.2.6rc2) (1.1.1)
Building wheels for collected packages: aibolit
  Building wheel for aibolit (setup.py) ... \u001b[?25l-\u0008 \u0008\\u0008 \u0008|\u0008 \u0008/\u0008 \u0008-\u0008 \u0008\\u0008 \u0008done
\u001b[?25h  Created wheel for aibolit: filename=aibolit-1.2.6rc2-py2.py3-none-any.whl size=12134778 sha256=62b06f6e01ee253c9a1cebcc3d36f3c423642db951c3a4261201d8f3272eea58
  Stored in directory: /tmp/pip-ephem-wheel-cache-zwz_mjnc/wheels/6a/94/20/fb6515fe78e005049099e68caee81e4e2e53c92744d4ab767f
Successfully built aibolit
Installing collected packages: aibolit
\u001b[33m  WARNING: The script aibolit is installed in '/home/r/.local/bin' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.\u001b[0m
Successfully installed aibolit-1.2.6rc2
\u001b[33mWARNING: You are using pip version 20.0.2; however, version 20.2.4 is available.
You should consider upgrading via the '/usr/bin/python3 -m pip install --upgrade pip' command.\u001b[0m
python3 -m flake8 aibolit test scripts setup.py --exclude scripts/target/*
python3 -m mypy aibolit
aibolit/ast_framework/block_statement_graph/statement.py:1: \u001b[1m\u001b[31merror:\u001b(B\u001b[m Skipping analyzing 'networkx': found module but no type hints or library stubs\u001b(B\u001b[m
aibolit/ast_framework/block_statement_graph/statement.py:4: \u001b[1m\u001b[31merror:\u001b(B\u001b[m Cannot find implementation or library stub for module named 'veniq.ast_framework'\u001b(B\u001b[m
aibolit/ast_framework/block_statement_graph/block.py:1: \u001b[1m\u001b[31merror:\u001b(B\u001b[m Skipping analyzing 'networkx': found module but no type hints or library stubs\u001b(B\u001b[m
aibolit/ast_framework/block_statement_graph/block.py:4: \u001b[1m\u001b[31merror:\u001b(B\u001b[m Cannot find implementation or library stub for module named 'veniq.ast_framework'\u001b(B\u001b[m
aibolit/ast_framework/block_statement_graph/_nodes_factory.py:2: \u001b[1m\u001b[31merror:\u001b(B\u001b[m Skipping analyzing 'networkx': found module but no type hints or library stubs\u001b(B\u001b[m
aibolit/ast_framework/block_statement_graph/_block_extractors.py:3: \u001b[1m\u001b[31merror:\u001b(B\u001b[m Cannot find implementation or library stub for module named 'veniq.ast_framework'\u001b(B\u001b[m
aibolit/ast_framework/block_statement_graph/_block_extractors.py:3: \u001b[34mnote:\u001b(B\u001b[m See \u001b[4mhttps://mypy.readthedocs.io/en/latest/running_mypy.html#missing-imports\u001b(B\u001b[m
aibolit/ast_framework/block_statement_graph/builder.py:2: \u001b[1m\u001b[31merror:\u001b(B\u001b[m Skipping analyzing 'networkx': found module but no type hints or library stubs\u001b(B\u001b[m
aibolit/ast_framework/block_statement_graph/builder.py:4: \u001b[1m\u001b[31merror:\u001b(B\u001b[m Cannot find implementation or library stub for module named 'veniq.ast_framework'\u001b(B\u001b[m
\u001b[1m\u001b[31mFound 8 errors in 5 files (checked 155 source files)\u001b(B\u001b[m
Makefile:39: recipe for target 'typecheck' failed
make: *** [typecheck] Error 1
container 94e8460fdb38076ecba9b33f2bd52fb5ba59640c9fd0e34a3e849db833999d7b is dead
Tue Nov  3 10:19:34 CET 2020

acheshkov · 2020-11-03T09:20:53Z

@aravij please take a look ))

acheshkov · 2020-11-06T09:51:53Z

@aravij please, remember

aravij · 2020-11-20T09:58:40Z

@acheshkov Please try one more time.

acheshkov · 2020-11-20T18:36:37Z

@rultor merge

rultor · 2020-11-20T18:37:21Z

@rultor merge

@acheshkov OK, I'll try to merge now. You can check the progress of the merge here

rultor · 2020-11-20T18:43:00Z

@rultor merge

@acheshkov @aravij Oops, I failed. You can see the full log here (spent 5min)

/home/r/repo/aibolit/metrics/cognitiveC/cognitive_c.py:108: DeprecationWarning: Call to deprecated method get_type. (Use ASTNode functionality instead.)
  each_block_type = ast.get_type(each_block)
/home/r/repo/aibolit/ast_framework/ast.py:203: DeprecationWarning: Call to deprecated method get_attr. (Use ASTNode functionality instead.)
  return self.get_attr(node, 'node_type')
/home/r/repo/aibolit/metrics/cognitiveC/cognitive_c.py:90: DeprecationWarning: Call to deprecated method get_type. (Use ASTNode functionality instead.)
  each_block_type = ast.get_type(each_block)
/home/r/repo/aibolit/metrics/cognitiveC/cognitive_c.py:75: DeprecationWarning: Call to deprecated method get_type. (Use ASTNode functionality instead.)
  assert(ast.get_type(node) == ASTNodeType.METHOD_INVOCATION)
/home/r/repo/aibolit/metrics/cognitiveC/cognitive_c.py:92: DeprecationWarning: Call to deprecated method get_binary_operation_name. (Use ASTNode functionality instead.)
  bin_operator = ast.get_binary_operation_name(each_block)
/home/r/repo/aibolit/ast_framework/ast.py:174: DeprecationWarning: Call to deprecated method get_type. (Use ASTNode functionality instead.)
  assert(self.get_type(node) == ASTNodeType.BINARY_OPERATION)
/home/r/repo/aibolit/ast_framework/ast.py:175: DeprecationWarning: Call to deprecated method children_with_type. (Use ASTNode functionality instead.)
  name_node, = islice(self.children_with_type(node, ASTNodeType.STRING), 1)
/home/r/repo/aibolit/ast_framework/ast.py:176: DeprecationWarning: Call to deprecated method get_attr. (Use ASTNode functionality instead.)
  return self.get_attr(name_node, 'string')
./home/r/repo/aibolit/metrics/cognitiveC/cognitive_c.py:48: DeprecationWarning: Call to deprecated method get_type. (Use ASTNode functionality instead.)
  if ast.get_type(all_childs[2]) == ASTNodeType.IF_STATEMENT:
.../home/r/repo/aibolit/metrics/cognitiveC/cognitive_c.py:63: DeprecationWarning: Call to deprecated method get_type. (Use ASTNode functionality instead.)
  if ast.get_type(binary_operation_node) != ASTNodeType.BINARY_OPERATION:
/home/r/repo/aibolit/metrics/cognitiveC/cognitive_c.py:66: DeprecationWarning: Call to deprecated method get_binary_operation_params. (Use ASTNode functionality instead.)
  operator, left_side_node, right_side_node = ast.get_binary_operation_params(binary_operation_node)
/home/r/repo/aibolit/ast_framework/ast.py:239: DeprecationWarning: Call to deprecated method get_type. (Use ASTNode functionality instead.)
  assert(self.get_type(binary_operation_node) == ASTNodeType.BINARY_OPERATION)
/home/r/repo/aibolit/ast_framework/ast.py:241: DeprecationWarning: Call to deprecated method get_attr. (Use ASTNode functionality instead.)
  return BinaryOperationParams(self.get_attr(operation_node, 'string'), left_side_node, right_side_node)
..............sss..................sss................................sssssss............................................................................sssssssssssssss.............................sssssssssssss.......ss...........................................................................................................................Number of features:  28
../home/r/repo/test/utils/test_cfg_builder.py:32: DeprecationWarning: Call to deprecated class JavaPackage. (This functionality must be transmitted to ASTNode)
  java_package = JavaPackage(Path(__file__).parent.absolute() / 'SimpleClass.java')
/home/r/repo/aibolit/ast_framework/java_package.py:54: DeprecationWarning: Call to deprecated class JavaClass. (This functionality must be transmitted to ASTNode)
  java_class = JavaClass(class_ast.tree, class_ast.root, self)
/home/r/repo/aibolit/ast_framework/java_class.py:48: DeprecationWarning: Call to deprecated method children_with_type. (Use ASTNode functionality instead.)
  class_name = next(self.children_with_type(self.root, ASTNodeType.STRING))
/home/r/repo/aibolit/ast_framework/java_class.py:61: DeprecationWarning: Call to deprecated class JavaClassMethod. (This functionality must be transmitted to ASTNode)
  method = JavaClassMethod(method_ast.tree, method_ast.root, self)
/home/r/repo/aibolit/ast_framework/java_class_method.py:46: DeprecationWarning: Call to deprecated method children_with_type. (Use ASTNode functionality instead.)
  method_name = next(self.children_with_type(self.root, ASTNodeType.STRING))
..ssssssssss
======================================================================
ERROR: test.integration.test_semantic_extraction (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: test.integration.test_semantic_extraction
Traceback (most recent call last):
  File "/usr/lib/python3.6/unittest/loader.py", line 428, in _find_test_path
    module = self._get_module_from_name(name)
  File "/usr/lib/python3.6/unittest/loader.py", line 369, in _get_module_from_name
    __import__(name)
  File "/home/r/repo/test/integration/test_semantic_extraction.py", line 30, in <module>
    from aibolit.extract_method_baseline.extract_semantic import extract_method_statements_semantic
ModuleNotFoundError: No module named 'aibolit.extract_method_baseline'


----------------------------------------------------------------------
Ran 425 tests in 32.558s

FAILED (errors=1, skipped=55)
Makefile:15: recipe for target 'unittest' failed
make: *** [unittest] Error 1
container 4252f12854b9e8e8021d18a779041730ccd66ea204e82550e608924805d7b607 is dead
Fri Nov 20 19:42:48 CET 2020

acheshkov · 2020-11-20T18:44:14Z

@aravij please check it )

[652] Update AST framework and tests.

5a5b6a1

aravij requested review from acheshkov, KatGarmash, lyriccoder and Vitaly-Protasov October 27, 2020 09:32

aravij self-assigned this Oct 27, 2020

aravij linked an issue Oct 27, 2020 that may be closed by this pull request

Update AST framework #652

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acheshkov previously approved these changes Nov 3, 2020

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[652] Update flake ignore list.

887cec7

aravij dismissed acheshkov’s stale review via 887cec7 November 3, 2020 07:47

acheshkov previously approved these changes Nov 3, 2020

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[652] Fix types.

af9d2c6

aravij dismissed acheshkov’s stale review via af9d2c6 November 20, 2020 09:56

aravij requested a review from acheshkov November 20, 2020 09:58

acheshkov approved these changes Nov 20, 2020

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Update AST framework and tests #653

Update AST framework and tests #653

aravij commented Oct 27, 2020 •

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acheshkov commented Nov 20, 2020

Update AST framework and tests #653

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Update AST framework and tests #653

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aravij commented Oct 27, 2020 • edited Loading

acheshkov commented Nov 3, 2020

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aravij commented Oct 27, 2020 •

edited

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