Fixed tests following update to CVode interface and added utilities &… #1
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| name: Test of package installation & execution | |
| 'on': | |
| push: | |
| branches-ignore: | |
| - gh-pages | |
| tags: | |
| - '*' | |
| schedule: | |
| - cron: 0 10 * * 1 | |
| jobs: | |
| build_cxx: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, macos-latest, windows-latest] | |
| with-coverage: [false] | |
| with-asan: [false] | |
| with-elf: [false] | |
| with-valgrind: [false] | |
| exclude: | |
| - os: windows-latest | |
| with-asan: true | |
| - os: ubuntu-latest | |
| with-asan: true | |
| - os: windows-latest | |
| with-valgrind: true | |
| - os: windows-latest | |
| with-elf: true | |
| - os: macos-latest | |
| with-elf: true | |
| - with-valgrind: true | |
| with-elf: true | |
| - with-valgrind: true | |
| with-asan: true | |
| - with-coverage: true | |
| with-valgrind: true | |
| - with-coverage: true | |
| with-asan: true | |
| fail-fast: false | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| ################################### | |
| # CONDA SETUP | |
| ################################### | |
| - name: Set up MSVC Compiler on windows | |
| uses: ilammy/msvc-dev-cmd@v1 | |
| if: matrix.os == 'windows-latest' | |
| - name: Set up miniconda test environment | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| activate-environment: ephoto | |
| environment-file: environment.yml | |
| auto-update-conda: true | |
| channels: conda-forge | |
| channel-priority: strict | |
| miniforge-variant: Mambaforge | |
| use-mamba: true | |
| - name: Install doxgen on unix systems | |
| if: matrix.os != 'windows-latest' | |
| shell: bash -l {0} | |
| run: | | |
| mamba install doxygen>=1.9.2 graphviz -y | |
| - name: Install compilers using conda on Linux/Mac | |
| if: matrix.os != 'windows-latest' | |
| shell: bash -l {0} | |
| run: | | |
| mamba install c-compiler cxx-compiler | |
| ################################### | |
| # SET CONFIG FLAGS | |
| ################################### | |
| - name: Global config flags | |
| shell: bash -l {0} | |
| run: | | |
| CMAKE_BUILD_TYPE_TEST="Debug" | |
| echo "CMAKE_BUILD_TYPE_TEST=Debug" >> "$GITHUB_ENV" | |
| echo "CMAKE_ARGS=-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON" >> "$GITHUB_ENV" | |
| echo "CMAKE_ARGS_TEST=-DBUILD_TESTS=ON" >> "$GITHUB_ENV" | |
| echo "TEST_FLAGS=-C ${CMAKE_BUILD_TYPE_TEST} --output-on-failure -VV" >> "$GITHUB_ENV" | |
| - name: Coverage config flags | |
| if: matrix.with-coverage == true && matrix.os != 'windows-latest' | |
| shell: bash -l {0} | |
| run: | | |
| echo "CMAKE_ARGS_TEST=${{ env.CMAKE_ARGS_TEST }} -DTEST_COVERAGE=ON" >> "$GITHUB_ENV" | |
| - name: ASAN config flags | |
| if: matrix.with-asan == true | |
| shell: bash -l {0} | |
| run: | | |
| echo "CMAKE_ARGS=${{ env.CMAKE_ARGS }} -DWITH_ASAN=ON" >> "$GITHUB_ENV" | |
| echo "ASAN_OPTIONS=detect_odr_violation=0:detect_container_overflow=0" >> $GITHUB_ENV | |
| echo "TEST_FLAGS=${{ env.TEST_FLAGS }} -E valgrind*" >> "$GITHUB_ENV" | |
| - name: ASAN dynamic library | |
| if: matrix.with-asan == true && matrix.os == 'macos-latest' | |
| shell: bash -l {0} | |
| run: | | |
| echo "DYLD_INSERT_LIBRARIES=$(clang -print-file-name=libclang_rt.asan_osx_dynamic.dylib)" >> "$GITHUB_ENV" | |
| - name: ELF config flags | |
| if: matrix.with-elf == true | |
| shell: bash -l {0} | |
| run: | | |
| echo "CMAKE_ARGS_TEST=${{ env.CMAKE_ARGS_TEST }} -DTEST_ELF=ON" >> "$GITHUB_ENV" | |
| - name: Valgrind off config flags | |
| if: matrix.with-valgrind == true | |
| shell: bash -l {0} | |
| run: | | |
| echo "CMAKE_ARGS_TEST=${{ env.CMAKE_ARGS_TEST }} -DTEST_VALGRIND=ON" >> "$GITHUB_ENV" | |
| ################################### | |
| # Add paths for Windows dlls | |
| ################################### | |
| - name: Conda library paths on Windows | |
| if: matrix.os == 'windows-latest' | |
| shell: bash -l {0} | |
| run: | | |
| # This isn't necessary, but it speeds up the build | |
| LIB_DIRECTORY="${CONDA_PREFIX}/Library/lib" | |
| ls ${LIB_DIRECTORY} | |
| echo "${LIB_DIRECTORY}" >> $GITHUB_PATH | |
| DLL_DIRECTORY="${CONDA_PREFIX}/Library/bin" | |
| ls ${DLL_DIRECTORY} | |
| echo "${DLL_DIRECTORY}" >> $GITHUB_PATH | |
| ################################### | |
| # Configure | |
| ################################### | |
| - name: Configure (CONDA) | |
| shell: bash -l {0} | |
| run: | | |
| mkdir build | |
| cd build | |
| which cmake | |
| cmake .. ${{ env.CMAKE_ARGS }} ${{ env.CMAKE_ARGS_NO_PYTHON }} ${{ env.CMAKE_ARGS_TEST }} | |
| ################################### | |
| # Build CXX | |
| ################################### | |
| - name: Build C++ & C (CONDA) | |
| shell: bash -l {0} | |
| run: | | |
| cd build | |
| cmake --build . --config ${{ env.CMAKE_BUILD_TYPE_TEST }} | |
| ################################### | |
| # Test CXX | |
| ################################### | |
| - name: Test C++ | |
| shell: bash -l {0} | |
| run: | | |
| mamba list | |
| echo "PATH=$PATH" | |
| cd build | |
| which ctest | |
| ctest ${{ env.TEST_FLAGS }} | |
| - name: Preserve coverage information | |
| if: matrix.with-coverage && matrix.os != 'windows-latest' | |
| shell: bash -l {0} | |
| run: | | |
| cp -r build/coverage coverage | |
| ################################### | |
| # Build Python | |
| ################################### | |
| # - name: Set CMAKE_ARGS for Python build | |
| # shell: bash -l {0} | |
| # run: | | |
| # echo "OLD_CMAKE_ARGS=${{ env.CMAKE_ARGS }}" >> "$GITHUB_ENV" | |
| # echo "CMAKE_ARGS=${{ env.CMAKE_ARGS }} -DBUILD_PYTHON=ON" >> "$GITHUB_ENV" | |
| # - name: Build Python (CONDA) | |
| # shell: bash -l {0} | |
| # run: | | |
| # cd build | |
| # which cmake | |
| # cmake .. ${{ env.CMAKE_ARGS }} ${{ env.CMAKE_ARGS_TEST }} | |
| # - name: Unset CMAKE_ARGS for Python build | |
| # shell: bash -l {0} | |
| # run: | | |
| # echo "CMAKE_ARGS=${{ env.OLD_CMAKE_ARGS }}" >> "$GITHUB_ENV" | |
| ################################### | |
| # Test Python | |
| ################################### | |
| # - name: Test Python Interfaces (CONDA) | |
| # if: matrix.with-elf == false && matrix.with-valgrind == false | |
| # shell: bash -l {0} | |
| # run: | | |
| # pytest -sv tests/python | |
| ################################### | |
| # Docs tests | |
| ################################### | |
| - name: Build docs | |
| if: matrix.os != 'windows-latest' | |
| shell: bash -l {0} | |
| run: | | |
| ./run_tests.sh --rebuild --docs | |
| ################################### | |
| # Coverage | |
| ################################### | |
| - name: Upload coverage report | |
| if: matrix.with-coverage == true && matrix.os != 'windows-latest' | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| name: ${{ matrix.os }}-${{ matrix.with-coverage }}-${{ matrix.with-asan }}-${{ matrix.with-elf }}-${{ matrix.with-valgrind }} | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: coverage/coverage.info | |
| functionalities: gcov |