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No longer suppressing package startup messages.
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eldrid01 committed Jun 15, 2021
1 parent a8f869d commit 409e1a7
Showing 1 changed file with 4 additions and 7 deletions.
11 changes: 4 additions & 7 deletions inst/scripts/extract_qdnaseq_copy_number_data.R
Original file line number Diff line number Diff line change
Expand Up @@ -39,13 +39,10 @@ digits <- opt$digits
if (is.null(input_file)) stop("QDNAseqCopyNumbers RDS file must be specified")
if (is.null(output_file)) stop("Output file must be specified")

suppressPackageStartupMessages({
library(tibble)
library(readr)
library(dplyr)
library(Biobase)
library(QDNAseq)
})
library(tibble)
library(readr)
library(dplyr)
library(Biobase)

copy_number <- readRDS(input_file)
if (!is(copy_number, "QDNAseqCopyNumbers")) stop(input_file, "does not contain a QDNAseqCopyNumbers object")
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