Releases · cytham/nanovar

29 Sep 13:15

cytham

v1.8.1

e8d7175

nanovar-v1.8.1 Latest

Latest

Patch to restrict NumPy version to <2.0.0 for TF compatibility

Assets 2

26 Sep 10:09

cytham

v1.8.0

dcc4070

nanovar-v1.8.0

* Migrated to pyproject.toml and removed setup.py
* Increased default minimum SV read coverage from 2 to 4
* Modified nanoinsight installation to manual and optional (for conda compatibility)
* Removed "htmlark" package requirement (for conda compatibility)
* Removed "progress" package requirement
* Fixed for #89 bedtools getfasta bug
* Fixed y-axis log scale bug in report
* Added samtools and minimap2 path in logs
* Added version in stdout logs

Assets 2

22 Jun 07:08

cytham

v1.7.0

a9612a4

nanovar-v1.7.0

* Added alternative sequence for INS and DEL in VCF
* Added CRAM input support
* Modified SV ID format with addition of SV type, from nv_SV?-????? to NV.INS.SV?-?????
* SV size now takes the median size amongst clustered reads, instead of the largest

Assets 2