Releases: d3b-center/annoFuseData
Releases · d3b-center/annoFuseData
v1.0.0
What's Changed
Full Changelog: v0.1.0...v1.0.0
What's Changed
- Update genelistreference.txt by @jharenza in #11
- de-duplicate genes, collapse file/type by @jharenza in #12
- add load library to R script by @jharenza in #13
Full Changelog: v.0.1.0...v1.0.0
v0.1.0
This release updates the HUGO symbols in the following files (to retain old and new symbols):
fusionreference.txt
genelistreference.txt
pfamDataBioMart.RDS
using a January 18, 2023 pull from the HUGO symbols FTP site.
This release also updates the kinase domains for the following 21 kinases with inaccurate or extra kinase domains noted, which causes a bug in determining if kinase domains are being retained in a fusion
AKT2
CAMKV
CDC7
CDK1
CDK5
EIF2AK1
EIF2AK3
LATS1
LATS2
MASTL
MINK1
MKNK1
NEK10
SRPK1
SRPK2
SRPK3
STRADA
PRKCB
EPHA6
NTRK1
TYK2
What's Changed
- Add dgd_fusions_testset by @sakshamphul in #2
- Revert "Add dgd_fusions_testset" by @sakshamphul in #3
- Add testset for Custom type and config file by @sakshamphul in #4
- updating RoxygenNote field in the DESCRIPTION by @federicomarini in #5
- updating description per file by @kgaonkar6 in #1
- Update reference files' HUGO symbols by @jharenza in #7
- Update pfam by @jharenza in #8
New Contributors
- @sakshamphul made their first contribution in #2
- @federicomarini made their first contribution in #5
- @kgaonkar6 made their first contribution in #1
- @jharenza made their first contribution in #7
Full Changelog: https://github.com/d3b-center/annoFuseData/commits/v0.1.0