Monthly Docker Build Validation #17
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1 error and 1 warning
buildx failed with: ERROR: failed to solve: process "/bin/sh -c apt update -y && apt upgrade -y && apt install -y build-essential git cpanminus curl wget unzip automake samtools tabix libmysqlclient-dev libncurses5-dev zlib1g-dev libgsl0-dev libexpat1-dev libgd-dev&& cpanm --notest LWP::Simple DBI DBD::mysql Archive::Zip Archive::Extract HTTP::Tiny Test::Simple File::Copy::Recursive Perl::OSType Module::Metadata version TAP::Harness CGI Encode CPAN::Meta JSON DBD::SQLite Set::IntervalTree Archive::Tar Time::HiRes Module::Build Bio::Root::Version && git clone https://github.com/Ensembl/ensembl-vep.git && cd ensembl-vep && git checkout release/${VEP_VERSION} && perl INSTALL.pl --NO_TEST --NO_UPDATE --AUTO ap --PLUGINS LoF --CACHEDIR cache && cd /ensembl-vep/cache && wget -q https://raw.githubusercontent.com/konradjk/loftee/v0.3-beta/splice_module.pl && cd / && wget https://github.com/mskcc/vcf2maf/archive/v${MAF_VERSION}.tar.gz && tar -xzf v${MAF_VERSION}.tar.gz && rm v${MAF_VERSION}.tar.gz && mv vcf2maf-${MAF_VERSION} vcf2maf && apt remove curl wget git -y && apt autoclean -y && apt autoremove -y" did not complete successfully: exit code: 1
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Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: docker/setup-buildx-action@v2, docker/build-push-action@v4. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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