Skip to content

Commit

Permalink
🔧 fix COPY ref
Browse files Browse the repository at this point in the history
  • Loading branch information
migbro committed Jun 12, 2024
1 parent 43b6025 commit 7f2e6f6
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion hbc_scrna_qc/v1.0.0-scrnaseq/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -13,4 +13,4 @@ RUN apt update -y && apt install -y libbz2-dev libglpk40 libhdf5-dev patch
RUN mkdir ~/.R && echo MAKEFLAGS = -j8 > ~/.R/Makevars && R -e "BiocManager::install(c('AnnotationHub', 'ensembldb', 'multtest', 'glmGamPoi'))"
RUN R -e "install.packages(c('optparse', 'cowplot', 'fitdistrplus', 'future', 'future.apply', 'ggrepel', 'ggridges', 'ica', 'igraph', 'irlba', 'leiden', 'lmtest', 'matrixStats', 'patchwork', 'pbapply', 'plotly', 'png', 'progressr', 'RANN', 'RcppAnnoy', 'reticulate', 'ROCR', 'Rtsne', 'scattermore', 'sctransform', 'spatstat.explore', 'spatstat.geom', 'uwot', 'RcppEigen', 'RcppProgress', 'sp', 'metap', 'hdf5r', 'patch'), type='source', Ncpus=8)"
RUN R -e "install.packages(c('${SEURATOBJECT_URL}','${SEURAT_URL}'), repos=NULL, type='source', Ncpus=8)"
COPY Docker .
COPY Dockerfile .

0 comments on commit 7f2e6f6

Please sign in to comment.