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adding docs for caDSR import (linkml#143)
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@@ -64,6 +64,21 @@ For example, for the `RNA Central public database <https://rnacentral.org/help/p | |
schemauto import-sql postgresql+psycopg2://reader:[email protected]:5432/pfmegrnargs | ||
Importing from caDSR | ||
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caDSR is an ISO-11179 compliant metadata registry. The ISO-11179 conceptual model can be mapped to LinkML. The | ||
canonical mapping maps a CDE onto a LinkML *slot*. | ||
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See `this entry in LinkML FAQ <https://linkml.io/linkml/faq/why-linkml.html#why-should-i-use-linkml-over-iso-11179>`_. | ||
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NCI implements a JSON serialization of ISO-11197. You can import this JSON and convert to LinkML: | ||
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.. code-block:: | ||
schemauto import-cadsr "cdes/*.json" | ||
Packages | ||
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@@ -81,3 +96,5 @@ Packages | |
.. autoclass:: DOSDPImportEngine | ||
:members: | ||
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.. autoclass:: CADSRImportEngine | ||
:members: |
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