Include support for neuroglancer url for umembargoed zarr and nifti #3715
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| name: CI for frontend | |
| on: | |
| pull_request: | |
| push: | |
| branches: | |
| - master | |
| schedule: | |
| - cron: "0 0 * * *" | |
| jobs: | |
| lint-type-check: | |
| defaults: | |
| run: | |
| working-directory: web | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-node@v4 | |
| with: | |
| node-version: 16 # TODO: use latest version when we update to Vue 3 | |
| - name: Install Vue app | |
| run: yarn install | |
| - name: Lint Vue app | |
| run: yarn run lint --no-fix | |
| - name: Type-check Vue app | |
| run: yarn run type-check | |
| - name: Build Vue app | |
| run: yarn run build | |
| test-e2e-puppeteer: | |
| runs-on: ubuntu-22.04 | |
| services: | |
| postgres: | |
| image: postgres:latest | |
| env: | |
| POSTGRES_DB: django | |
| POSTGRES_PASSWORD: postgres | |
| ports: | |
| - 5432:5432 | |
| rabbitmq: | |
| image: rabbitmq:management | |
| ports: | |
| - 5672:5672 | |
| minio: | |
| # This image does not require any command arguments (which GitHub Actions don't support) | |
| image: bitnami/minio:latest | |
| env: | |
| MINIO_ROOT_USER: minioAccessKey | |
| MINIO_ROOT_PASSWORD: minioSecretKey | |
| ports: | |
| - 9000:9000 | |
| env: | |
| # API server env vars | |
| DJANGO_DATABASE_URL: postgres://postgres:postgres@localhost:5432/django | |
| DJANGO_MINIO_STORAGE_ENDPOINT: localhost:9000 | |
| DJANGO_MINIO_STORAGE_ACCESS_KEY: minioAccessKey | |
| DJANGO_MINIO_STORAGE_SECRET_KEY: minioSecretKey | |
| DJANGO_STORAGE_BUCKET_NAME: dandi-bucket | |
| DJANGO_DANDI_DANDISETS_BUCKET_NAME: dandi-bucket | |
| DJANGO_DANDI_DANDISETS_LOG_BUCKET_NAME: dandiapi-dandisets-logs | |
| DJANGO_DANDI_DANDISETS_EMBARGO_LOG_BUCKET_NAME: dandiapi-embargo-dandisets-logs | |
| DJANGO_DANDI_WEB_APP_URL: http://localhost:8085 | |
| DJANGO_DANDI_API_URL: http://localhost:8000 | |
| DJANGO_DANDI_JUPYTERHUB_URL: https://hub.dandiarchive.org/ | |
| DJANGO_DANDI_DEV_EMAIL: [email protected] | |
| DANDI_ALLOW_LOCALHOST_URLS: 1 | |
| # Web client env vars | |
| VITE_APP_DANDI_API_ROOT: http://localhost:8000/api/ | |
| VITE_APP_OAUTH_API_ROOT: http://localhost:8000/oauth/ | |
| VITE_APP_OAUTH_CLIENT_ID: Dk0zosgt1GAAKfN8LT4STJmLJXwMDPbYWYzfNtAl | |
| # E2E tests env vars | |
| CLIENT_URL: http://localhost:8085 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-node@v4 | |
| with: | |
| cache: 'yarn' | |
| cache-dependency-path: web/yarn.lock | |
| - name: Install web app | |
| if: steps.yarn-cache.outputs.cache-hit != 'true' | |
| run: yarn install --frozen-lockfile --prefer-offline | |
| working-directory: web | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.11' | |
| - name: Install latest version of pip | |
| run: pip install --upgrade pip | |
| - uses: actions/cache@v4 | |
| id: pip-cache | |
| with: | |
| path: ${{ env.pythonLocation}}/lib/python3.11/site-packages/* | |
| key: ${{ env.pythonLocation }}-${{ hashFiles('requirements.txt') }}-${{ hashFiles('setup.py') }} | |
| - name: Install dandi-api dependencies | |
| run: pip install --upgrade --upgrade-strategy eager -e .[dev] | |
| - name: Apply migrations to API server | |
| run: python manage.py migrate | |
| - name: Create any cache tables | |
| run: python manage.py createcachetable | |
| # Populate the database with a dandiset for FileBrowser tests | |
| - name: Create a superuser | |
| run: python manage.py createsuperuser --noinput --email [email protected] | |
| - name: Create Dandiset | |
| run: python manage.py create_dev_dandiset --owner [email protected] | |
| - name: Install E2E tests | |
| run: yarn install --frozen-lockfile | |
| working-directory: e2e/puppeteer | |
| - name: Lint E2E tests | |
| run: yarn run lint --no-fix --max-warnings=0 | |
| working-directory: e2e/puppeteer | |
| - name: Run E2E tests | |
| run: | | |
| # start vue dev server and wait for it to start | |
| yarn --cwd ../../web/ run dev 2> /dev/null & | |
| while ! nc -z localhost 8085; do | |
| sleep 3 | |
| done | |
| # start the dandi-api server | |
| python ../../manage.py runserver & | |
| # run the E2E tests | |
| yarn run test | |
| working-directory: e2e/puppeteer | |
| test-e2e-playwright: | |
| runs-on: ubuntu-22.04 | |
| services: | |
| postgres: | |
| image: postgres:latest | |
| env: | |
| POSTGRES_DB: django | |
| POSTGRES_PASSWORD: postgres | |
| ports: | |
| - 5432:5432 | |
| rabbitmq: | |
| image: rabbitmq:management | |
| ports: | |
| - 5672:5672 | |
| minio: | |
| # This image does not require any command arguments (which GitHub Actions don't support) | |
| image: bitnami/minio:latest | |
| env: | |
| MINIO_ROOT_USER: minioAccessKey | |
| MINIO_ROOT_PASSWORD: minioSecretKey | |
| ports: | |
| - 9000:9000 | |
| env: | |
| # API server env vars | |
| DJANGO_DATABASE_URL: postgres://postgres:postgres@localhost:5432/django | |
| DJANGO_MINIO_STORAGE_ENDPOINT: localhost:9000 | |
| DJANGO_MINIO_STORAGE_ACCESS_KEY: minioAccessKey | |
| DJANGO_MINIO_STORAGE_SECRET_KEY: minioSecretKey | |
| DJANGO_STORAGE_BUCKET_NAME: dandi-bucket | |
| DJANGO_DANDI_DANDISETS_BUCKET_NAME: dandi-bucket | |
| DJANGO_DANDI_DANDISETS_LOG_BUCKET_NAME: dandiapi-dandisets-logs | |
| DJANGO_DANDI_DANDISETS_EMBARGO_LOG_BUCKET_NAME: dandiapi-embargo-dandisets-logs | |
| DJANGO_DANDI_WEB_APP_URL: http://localhost:8085 | |
| DJANGO_DANDI_API_URL: http://localhost:8000 | |
| DJANGO_DANDI_JUPYTERHUB_URL: https://hub.dandiarchive.org/ | |
| DJANGO_DANDI_DEV_EMAIL: [email protected] | |
| DANDI_ALLOW_LOCALHOST_URLS: 1 | |
| # Web client env vars | |
| VITE_APP_DANDI_API_ROOT: http://localhost:8000/api/ | |
| VITE_APP_OAUTH_API_ROOT: http://localhost:8000/oauth/ | |
| VITE_APP_OAUTH_CLIENT_ID: Dk0zosgt1GAAKfN8LT4STJmLJXwMDPbYWYzfNtAl | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-node@v4 | |
| with: | |
| node-version: 18 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.11' | |
| - name: Install web app | |
| run: yarn install --frozen-lockfile | |
| working-directory: web | |
| - name: Install latest version of pip | |
| run: pip install --upgrade pip | |
| - uses: actions/cache@v4 | |
| id: pip-cache | |
| with: | |
| path: ${{ env.pythonLocation}}/lib/python3.11/site-packages/* | |
| key: ${{ env.pythonLocation }}-${{ hashFiles('requirements.txt') }}-${{ hashFiles('setup.py') }} | |
| - name: Install dandi-api dependencies | |
| run: pip install --upgrade --upgrade-strategy eager -e .[dev] | |
| - name: Apply migrations to API server | |
| run: python manage.py migrate | |
| - name: Create any cache tables | |
| run: python manage.py createcachetable | |
| - name: Install test data | |
| run: python manage.py loaddata playwright | |
| - name: Install dependencies | |
| run: yarn install --frozen-lockfile | |
| working-directory: e2e/playwright | |
| - name: Install Playwright Browsers | |
| run: npx playwright install --with-deps | |
| working-directory: e2e/playwright | |
| - name: Run Playwright tests | |
| run: | | |
| # start vue dev server | |
| yarn --cwd ../../web/ run dev 2> /dev/null & | |
| while ! nc -z localhost 8085; do | |
| sleep 3 | |
| done | |
| # start the dandi-api server | |
| python ../../manage.py runserver & | |
| # run the tests | |
| npx playwright test | |
| working-directory: e2e/playwright | |
| - uses: actions/upload-artifact@v4 | |
| if: always() | |
| with: | |
| name: playwright-report | |
| path: e2e/playwright/playwright-report/ | |
| retention-days: 30 |