rf: move output_dandi_linkml_schema() and supporting def

From `cli/tools.py` to `tools.py`

src/dandisets_linkml_status_tools/cli/tools.py

@@ -5,13 +5,13 @@
 from shutil import rmtree
 from typing import Any
 
-from linkml_runtime.dumpers import yaml_dumper
 from pydantic import TypeAdapter
 from yaml import dump as yaml_dump
 
 from dandisets_linkml_status_tools.tools import (
-    DandiModelLinkmlValidator,
-    get_pydantic_err_counts, get_linkml_err_counts,
+    get_pydantic_err_counts,
+    get_linkml_err_counts,
+    output_dandi_linkml_schema,
 )
 
 try:
@@ -160,21 +160,6 @@ def output_reports(
     logger.info("Output of dandiset validation reports completed")
 
 
-def output_dandi_linkml_schema(output_path: Path) -> None:
-    """
-    Output the DANDI LinkML schema, in YAML, to a file
-
-    :param output_path: The path specifying the location of the file
-    """
-    # Output the LinkML schema used in the validations
-    dandi_linkml_schema_yml = yaml_dumper.dumps(
-        DandiModelLinkmlValidator.get_dandi_linkml_schema()
-    )
-    with output_path.open("w") as f:
-        f.write(dandi_linkml_schema_yml)
-    logger.info("Output the DANDI LinkML schema to %s", output_path)
-
-
 def _write_data(
     data: Any, data_adapter: TypeAdapter, base_file_name: str, output_dir: Path
 ) -> None:
@@ -208,5 +193,3 @@ def _gen_row(cell_str_values: Iterable[str]) -> str:
     Note: The given iterable of cell string values are `str` values
     """
     return f'|{"|".join(cell_str_values)}|\n'
-
-

src/dandisets_linkml_status_tools/tools.py

@@ -13,6 +13,7 @@
 from linkml.validator import JsonschemaValidationPlugin, Validator
 from linkml.validator.plugins import ValidationPlugin
 from linkml.validator.report import ValidationResult
+from linkml_runtime.dumpers import yaml_dumper
 from linkml_runtime.linkml_model import SchemaDefinition
 
 from pydantic import BaseModel, TypeAdapter, ValidationError
@@ -22,7 +23,9 @@
 from .models import (
     ValidationReport,
     DandisetLinkmlTranslationReport,
-    PydanticValidationErrsType, JsonschemaValidationErrorType, LinkmlValidationErrsType,
+    PydanticValidationErrsType,
+    JsonschemaValidationErrorType,
+    LinkmlValidationErrsType,
 )
 
 logger = logging.getLogger(__name__)
@@ -305,3 +308,18 @@ def sorting_key(
         count_err(e)
 
     return compile_counts()
+
+
+def output_dandi_linkml_schema(output_path: Path) -> None:
+    """
+    Output the DANDI LinkML schema, in YAML, to a file
+
+    :param output_path: The path specifying the location of the file
+    """
+    # Output the LinkML schema used in the validations
+    dandi_linkml_schema_yml = yaml_dumper.dumps(
+        DandiModelLinkmlValidator.get_dandi_linkml_schema()
+    )
+    with output_path.open("w") as f:
+        f.write(dandi_linkml_schema_yml)
+    logger.info("Output the DANDI LinkML schema to %s", output_path)