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EMBL-EBI Open Targets Software Developer technical test answers repository

Provides access to given target and disease data via FTP within Dask ensuring performace through efficient parallelization. Data is quickly integrated, processed, and analyzed.

Installation

Install the Python dependencies using:

pip install -r requirements.txt

Usage

To access all given data and parse it, please run:

python target-disease.py

Outputs

Two outputs will be generated in JSON format:

  • Ordered target-disease associations
  • Joint target and disease information
  • NOTE

    This is a pseudocode which still need adaptation to ensure efficient performance and reproducibility.

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