E2e notebooks

[SergioRec]

Description

Added e2e notebooks for Leeds, Marseille and London (incomplete).
Added toml config files for e2e notebooks.
Restructured notebooks/e2e directory.

Motivation and Context

Example e2e notebooks to run pipeline for regions of interest.

Type of change

• Bug fix (non-breaking change which fixes an issue)
• New feature (non-breaking change which adds functionality)
• Breaking change (fix or feature that would cause existing functionality to not work as expected)

How Has This Been Tested?

Notebooks were run and outputs produced.

Test configuration details:

• OS: macOS Ventura
• Python version: 3.9
• Java version: openJDK 11.0.2
• Python management system: pip/conda

Advice for reviewer

To note:

• Inputs and outputs are stored in GCP.
• None of the notebooks use the currently in development modules for transport network and metrics. They will need to be added later.
• London does not include the steps to calculate transport network and metrics as it depends on module development.

Checklist:

• My code follows the intended structure of this project
• I have performed a self-review of my own code
• I have commented my code, particularly in hard-to-understand areas
• I have made corresponding changes to the documentation
• My changes generate no new warnings
• I have added tests that prove my fix is effective or that my feature works
• New and existing unit tests pass locally with my changes
• Any dependent changes have been merged and published in downstream modules

Additional comments

No need to review in depth.

[codecov-commenter]

Codecov Report

All modified and coverable lines are covered by tests ✅

Comparison is base (f60bccd) 97.81% compared to head (8b4644f) 97.81%.

Additional details and impacted files

@@           Coverage Diff           @@
##              dev     #192   +/-   ##
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  Coverage   97.81%   97.81%           
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  Files          14       14           
  Lines        1188     1188           
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  Hits         1162     1162           
  Misses         26       26           

Flag	Coverage Δ
unittests	97.81% <ø> (ø)

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[SergioRec]

Draft. Need to add new analyse_network and metrics modules when ready.