Initial commit

.dockerignore

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+**/*-sources.jar

.editorconfig

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+#  https://editorconfig.org/
+root = true
+
+[*]
+charset = utf-8
+end_of_line = lf
+indent_style = space
+indent_size = 2
+trim_trailing_whitespace = true
+insert_final_newline = true
+
+[*.{bat,cmd}]
+end_of_line = crlf
+
+[pom.xml]
+indent_style = tab
+indent_size = 2

.gitattributes

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+# EOL normalization for all files detected as text (ie. eol=lf)
+* text=auto eol=lf
+
+# Unix files
+*.sh                text
+
+# Java and Kotlin
+*.kt                text
+*.java              text
+
+# Misc
+*.kts               text
+*.env               text
+*.sql               text
+*.md                text
+*.txt               text
+*.xml               text
+*.yml               text
+*.yaml              text
+*.json              text
+*.toml              text
+*.conf              text
+*.config            text
+*.gradle            text
+*.defaults          text
+*.properties        text
+*.graphml           text
+Dockerfile*         text
+spring.factories    text
+
+# Windows scripts
+*.bat               text eol=crlf
+*.cmd               text eol=crlf
+
+# Image files
+*.png               binary
+*.jpg               binary
+*.jpeg              binary
+*.gif               binary
+
+# Archives
+*.jar               binary
+*.war               binary
+*.tar               binary
+*.tar.gz            binary
+*.tar.bz2           binary
+*.zip               binary
+*.7z                binary

.github/.env

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+# Config for running integration tests
+SPRING_PROFILES_ACTIVE=test
+DCSA_LOG_LEVEL=DEBUG

.github/dependabot.yml

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+# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates
+
+version: 2
+updates:
+  - package-ecosystem: "maven"
+    directory: "/"
+    schedule:
+      interval: "weekly"
+    open-pull-requests-limit: 10
+    labels:
+    - "dependencies"
+  - package-ecosystem: "github-actions"
+    directory: "/"
+    schedule:
+      interval: "weekly"
+    open-pull-requests-limit: 10
+    labels:
+    - "dependencies"

.github/workflows/docker_publish.yml

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+# name: Docker
+
+# # This workflow uses actions that are not certified by GitHub.
+# # They are provided by a third-party and are governed by
+# # separate terms of service, privacy policy, and support
+# # documentation.
+
+# on:
+#   create:
+#     tags:
+#       - v*
+
+# env:
+#   # Use docker.io for Docker Hub if empty
+#   REGISTRY: ghcr.io
+#   # github.repository as <account>/<repo>
+#   IMAGE_NAME: ${{ github.repository }}
+
+# jobs:
+#   build:
+
+#     runs-on: ubuntu-latest
+#     permissions:
+#       contents: read
+#       packages: write
+
+#     steps:
+#       - name: Checkout repository
+#         uses: actions/checkout@v3
+#         with:
+#           submodules: recursive
+
+#       - name: Set up Java JDK
+#         uses: actions/setup-java@v2
+#         with:
+#           distribution: 'temurin'
+#           java-version: 17
+#           cache: 'maven'
+
+#       - name: maven-settings-xml-action
+#         uses: whelk-io/maven-settings-xml-action@v12
+#         with:
+#           repositories: '[{ "id": "github", "name": "DCSA Backend repo", "url": "https://maven.pkg.github.com/dcsaorg/DCSA-Core", "releases": { "enabled": "true" }, "snapshots": { "enabled": "true" } }]'
+#           servers: '[{ "id": "github", "username": "${{ secrets.DCSA_USER }}", "password": "${{ secrets.DCSA_PACKAGES_PAT }}" }]'
+
+#       - name: maven build
+#         run: mvn -B package --file pom.xml
+
+
+#       # Build and push Docker image
+#       # https://github.com/marketplace/actions/docker-build-push-action
+#       - name: Build and push Docker image
+#         uses: mr-smithers-excellent/docker-build-push@v5
+#         with:
+#           image: dcsa-template
+#           registry: ghcr.io
+#           githubOrg: dcsaorg
+#           username: ${{ github.actor }}
+#           password: ${{ secrets.GITHUB_TOKEN }}
+#           addLatest: ${{ true }}

.github/workflows/master.yml

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+name: DCSA-TEMPLATE MASTER CI
+
+on:
+  push:
+    branches:
+      - master
+  pull_request:
+    branches:
+      - master
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v3
+        with:
+          path: DCSA-Project-Template
+          submodules: recursive
+
+      - name: Set up Java JDK
+        uses: actions/setup-java@v2
+        with:
+          distribution: 'temurin'
+          java-version: 17
+          cache: 'maven'
+
+      - name: maven-settings-xml-action
+        uses: whelk-io/maven-settings-xml-action@v12
+        with:
+          repositories: '[{ "id": "github", "name": "DCSA Backend repo", "url": "https://maven.pkg.github.com/dcsaorg/DCSA-Core", "releases": { "enabled": "true" }, "snapshots": { "enabled": "true" } }]'
+          servers: '[{ "id": "github", "username": "${{ secrets.DCSA_USER }}", "password": "${{ secrets.DCSA_PACKAGES_PAT }}" }]'
+
+      - name: Build Template
+        run: cd DCSA-Project-Template && mvn clean -U -B package -Ddcsa.artifacttype=-SNAPSHOT
+
+      - name: Build and run the microservices
+        run: cd DCSA-Project-Template && docker-compose -f docker-compose.yml --env-file=.github/.env up -d -V --build
+
+      - name: Fetch Backend Status
+        run: |
+          sleep 10
+          status=$(curl -s http://localhost:9090/actuator/health | jq -r '.status')
+          retries=12
+
+          while [[ "$status" != "UP" ]] && [[ $retries -gt 0 ]]; do
+            echo "Status is '$status' - waiting 5 secs ($retries retries left)"
+            sleep 5
+            retries=$((retries - 1))
+            status=$(curl -s http://localhost:9090/actuator/health | jq -r '.status')
+          done
+
+          echo "Final status is '$status'"
+          if [[ "$status" != "UP" ]]; then
+            curl -v http://localhost:9090/actuator/health || :
+            docker ps || :
+            docker logs dcsa-template_dcsa-template_1 || :
+            exit 1
+          fi
+
+          echo "::set-output name=STATUS::$status"
+        id: healthcheck
+
+      - name: Confirm microservice status
+        if: ${{ steps.healthcheck.outputs.STATUS == 'UP' }}
+        run: |
+          echo "The DCSA-Project-Template service is UP."
+
+      # - name: Publish package
+      #   run: cd DCSA-PROJECT-TEMPLATE && mvn -U -B deploy -DskipTests -Ddcsa.artifacttype=-SNAPSHOT
+      #   if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/master' }}

.gitignore

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+# Maven
+.flattened-pom.xml
+HELP.md
+target/
+!.mvn/wrapper/maven-wrapper.jar
+!**/src/main/**
+!**/src/test/**
+
+### STS ###
+.apt_generated
+.classpath
+.factorypath
+.project
+.settings
+.springBeans
+.sts4-cache
+
+### IntelliJ IDEA ###
+.idea
+*.iws
+*.iml
+*.ipr
+
+/out
+
+### NetBeans ###
+/nbproject/private/
+/nbbuild/
+/dist/
+/nbdist/
+/.nb-gradle/
+build/
+
+### VS Code ###
+.vscode/

.mvn/wrapper/MavenWrapperDownloader.java

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+/*
+ * Copyright 2007-present the original author or authors.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      https://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+import java.net.*;
+import java.io.*;
+import java.nio.channels.*;
+import java.util.Properties;
+
+public class MavenWrapperDownloader {
+
+    private static final String WRAPPER_VERSION = "0.5.6";
+    /**
+     * Default URL to download the maven-wrapper.jar from, if no 'downloadUrl' is provided.
+     */
+    private static final String DEFAULT_DOWNLOAD_URL = "https://repo.maven.apache.org/maven2/io/takari/maven-wrapper/"
+        + WRAPPER_VERSION + "/maven-wrapper-" + WRAPPER_VERSION + ".jar";
+
+    /**
+     * Path to the maven-wrapper.properties file, which might contain a downloadUrl property to
+     * use instead of the default one.
+     */
+    private static final String MAVEN_WRAPPER_PROPERTIES_PATH =
+            ".mvn/wrapper/maven-wrapper.properties";
+
+    /**
+     * Path where the maven-wrapper.jar will be saved to.
+     */
+    private static final String MAVEN_WRAPPER_JAR_PATH =
+            ".mvn/wrapper/maven-wrapper.jar";
+
+    /**
+     * Name of the property which should be used to override the default download url for the wrapper.
+     */
+    private static final String PROPERTY_NAME_WRAPPER_URL = "wrapperUrl";
+
+    public static void main(String args[]) {
+        System.out.println("- Downloader started");
+        File baseDirectory = new File(args[0]);
+        System.out.println("- Using base directory: " + baseDirectory.getAbsolutePath());
+
+        // If the maven-wrapper.properties exists, read it and check if it contains a custom
+        // wrapperUrl parameter.
+        File mavenWrapperPropertyFile = new File(baseDirectory, MAVEN_WRAPPER_PROPERTIES_PATH);
+        String url = DEFAULT_DOWNLOAD_URL;
+        if(mavenWrapperPropertyFile.exists()) {
+            FileInputStream mavenWrapperPropertyFileInputStream = null;
+            try {
+                mavenWrapperPropertyFileInputStream = new FileInputStream(mavenWrapperPropertyFile);
+                Properties mavenWrapperProperties = new Properties();
+                mavenWrapperProperties.load(mavenWrapperPropertyFileInputStream);
+                url = mavenWrapperProperties.getProperty(PROPERTY_NAME_WRAPPER_URL, url);
+            } catch (IOException e) {
+                System.out.println("- ERROR loading '" + MAVEN_WRAPPER_PROPERTIES_PATH + "'");
+            } finally {
+                try {
+                    if(mavenWrapperPropertyFileInputStream != null) {
+                        mavenWrapperPropertyFileInputStream.close();
+                    }
+                } catch (IOException e) {
+                    // Ignore ...
+                }
+            }
+        }
+        System.out.println("- Downloading from: " + url);
+
+        File outputFile = new File(baseDirectory.getAbsolutePath(), MAVEN_WRAPPER_JAR_PATH);
+        if(!outputFile.getParentFile().exists()) {
+            if(!outputFile.getParentFile().mkdirs()) {
+                System.out.println(
+                        "- ERROR creating output directory '" + outputFile.getParentFile().getAbsolutePath() + "'");
+            }
+        }
+        System.out.println("- Downloading to: " + outputFile.getAbsolutePath());
+        try {
+            downloadFileFromURL(url, outputFile);
+            System.out.println("Done");
+            System.exit(0);
+        } catch (Throwable e) {
+            System.out.println("- Error downloading");
+            e.printStackTrace();
+            System.exit(1);
+        }
+    }
+
+    private static void downloadFileFromURL(String urlString, File destination) throws Exception {
+        if (System.getenv("MVNW_USERNAME") != null && System.getenv("MVNW_PASSWORD") != null) {
+            String username = System.getenv("MVNW_USERNAME");
+            char[] password = System.getenv("MVNW_PASSWORD").toCharArray();
+            Authenticator.setDefault(new Authenticator() {
+                @Override
+                protected PasswordAuthentication getPasswordAuthentication() {
+                    return new PasswordAuthentication(username, password);
+                }
+            });
+        }
+        URL website = new URL(urlString);
+        ReadableByteChannel rbc;
+        rbc = Channels.newChannel(website.openStream());
+        FileOutputStream fos = new FileOutputStream(destination);
+        fos.getChannel().transferFrom(rbc, 0, Long.MAX_VALUE);
+        fos.close();
+        rbc.close();
+    }
+
+}

.mvn/wrapper/maven-wrapper.properties

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+distributionUrl=https://repo.maven.apache.org/maven2/org/apache/maven/apache-maven/3.6.3/apache-maven-3.6.3-bin.zip
+wrapperUrl=https://repo.maven.apache.org/maven2/io/takari/maven-wrapper/0.5.6/maven-wrapper-0.5.6.jar

Dockerfile

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+FROM eclipse-temurin:17-jre-alpine
+
+EXPOSE 9090
+ENV db_hostname dcsa_db
+COPY run-in-container.sh /run.sh
+RUN chmod +x /run.sh
+COPY application/src/main/resources/application.yml .
+COPY application/target/dcsa-template-application.jar .
+CMD ["/run.sh"]