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V2.0 todo #1776
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ddsjoberg
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Jun 29, 2024
* progress * Bridge updates (#1570) * progress * Update NEWS.md * Update NEWS.md * small updates * Selecting updates (#1573) * in progress * progress * GH Action workflow updates (#1574) * updates * more updates * Update test-coverage.yaml * Update pull_request_template.md * updates * updates * Update NEWS.md * Assign digits (#1575) * in progress * progress * Dynamic column headers (#1576) * in progress * progress * progress * Update DESCRIPTION * progress * Update tbl_summary.R * Updating with the `tbl_summary(sort)` argument (#1583) * in progress * Update tbl_summary.R * moving indentation to its own table styling enttry (#1584) * moving indentation to its own table styling enttry * Update NEWS.md * check updates * Update DESCRIPTION * Adding `tbl_summary(percent)` argument (#1585) * updates * updates * progress (#1595) * doc updates * adding default stat labels * progress * Update tbl_summary.R * Update bridge_summary.R * style * Update README.Rmd * dichotomous variable updates * Update test-tbl_summary.R * checks updates * forcats shim update * purrr shim update * Update test-tbl_summary.R * new checks file * lil updates * Adding more `tbl_summary()` tests and organizing snapshot tests (#1604) * data arg update * by arg update for snaps * snap updates for label argument * snaps sort arg * more updates * trucking along * Update tbl_summary.md * more testing * doc update * messaging update * Update .Rbuildignore * updates * updates after cards rename * adding ARDs as lists inside tbl_summary * Create import-standalone-tibble.R * selecting updates (#1611) * rename column summary_type to var_type (#1612) * Adding v2 `add_p.tbl_summary()` (#1615) * in progress * in progress * Update style_sigfig.R * in progress * progress * progress * progress * progress * progress * updates * progress * progress * Update test-add_p.tbl_summary.R * updates * Update R-CMD-check.yaml * Update R-CMD-check.yaml * Update R-CMD-check.yaml * Update R-CMD-check.yaml * more updates * Update test-coverage.yaml * more updates * progress * Update R-CMD-check-as-cran.yaml * Update R-CMD-check-as-cran.yaml * progress * updates * Update R-CMD-check.yaml * more updates * Update add_p.R * more updates * Adding `add_difference.tbl_summary()` to v2 branch (#1634) * more progress * more updates * Update DESCRIPTION * Update DESCRIPTION * Update DESCRIPTION * Update DESCRIPTION * idk what's going on * Update DESCRIPTION * Update test-add_difference.tbl_summary.R * Update DESCRIPTION * emmeans updates * emmeans updates * Update DESCRIPTION * updates * Update utils-add_p_tests.R * First draft of `card_summary()` (#1636) * first draft of `card_summary()` * Update card_summary.R * adding some unit tests * more tests * styler * Generalizing `brdg_summary()` and supporting `pier_*()` functions (#1642) * brdg updates! * updates * v2.0 Adding `add_n.tbl summary()` (#1645) * adding add_n.tbl_summary() * Update add_n.R * Update add_n.R * lil updates * progress * Adding v2.0 `tbl_regression()` (#1648) * progress * doc updates * updates * Update DESCRIPTION * Update test-tbl_regression.R * bridge rename (#1661) * Adding `add_q()` (#1662) * v2.0 `add_overall.tbl summary()` (#1663) * progress * progress * styler * progress (#1664) * V2.0 adding pkgdown (#1665) * adding pkgdown yaml * doc update * doc updates related to pkgdown * v2.0 Adding `add_stat()` (#1667) * progress * Update add_stat.md * lil updates * Update _pkgdown.yml * v2.0 `add_stat_label.tbl_summary()` (#1669) * progress * progress * doc updates * Update add_stat_label.R * v2.0 `modify_table_styling()` (#1672) * progress * progress * progress (#1673) * v2.0 `modify_header()`, `modify_spanning_header()`, `modify_footnote()`, `modify_caption()` (#1676) * progress * progress * Create test-modify_spanning_header.R * progress (#1677) * v2.0 `modify_column_hide()`, `modify_column_unhide()`, `modify_column_alignment()`, `modify_column_indent()` (#1678) * in progress * progress * progress * v2.0 `modify_fmt_fun()` (#1679) * progress * Update DESCRIPTION * Update DESCRIPTION * v2.0 bold and italicize labels and levels (#1680) * progress * Update _pkgdown.yml * v2.0 `bold_p()` (#1686) * progress * progress * progress * v2.0 Migrating themes (#1685) * progress * progress * Update DESCRIPTION * progress * Update test-theme_gtsummary.R * Update _pkgdown.yml * v2.0 `style_*()` migration (#1688) * in progress * style updates * progress * v2.0 language translations (#1682) * in progress * Update sysdata.rda * progress * V2.0 `tbl_stack()` (#1694) * adding function * lil updates * Update utils-add_p_tests.R * v2.0 `tbl_uvregression()` (#1692) * progress * updates * updates * progress * in progress * progress * progress * Update tbl_uvregression.Rd * progress * Update DESCRIPTION * V2.0 `separate_p_footnotes()` (#1695) * progress * progress * updates * Update _pkgdown.yml * V2.0 `tbl_custom_summary()` (#1698) * progress * progress * progress * Update _pkgdown.yml * progress (#1700) * v2.0 regression tidiers + S3 methods (#1701) * progress * updates * docs * updates * trying to get pkgdown to work * updates * v2.0 `add_global_p()` (#1706) * progress * Update R-CMD-check.yaml * progress (#1707) * V2.0 `add_vif()` (#1708) * progress * Update _pkgdown.yml * Update _pkgdown.yml * progress (#1709) * V2.0 `tbl_butcher()` (#1711) * progress * Update NEWS.md * progress (#1710) * v2.0 Adding `add ci.tbl summary()` (#1666) * in progress * doc updates * Update add_ci.R * progress * progress * progress * Update _pkgdown.yml * Update NEWS.md * Update NEWS.md * Update DESCRIPTION * doc update * Update add_ci.R * V2.0 `add_nevent.tbl uvregression()` (#1713) * progress * doc updates * V2.0 `add_p.tbl continuous()` (#1717) * progress * Update _pkgdown.yml * lil gt updates (#1718) * V2.0 `as_tibble()` (#1719) * progress * redoc * progress (#1721) * V2.0 standalone updates (#1722) * update standalone scripts * Update tbl_summary.R * v2.0 `tbl_merge()` (#1703) * progress * Update test-tbl_uvregression.R * remove deps * v2.0 `tbl_crosss()`, `add_p.tbl_cross()` (#1702) * progress * doc updates * updates * V2.0 `add_glance_*()` (#1724) * in progress * glancing * V2.0 more selectors (#1726) * adding selectors * update * V2.0 `tbl_survfit()` (#1728) * in progress * progress * progress * progress * Update DESCRIPTION * Update DESCRIPTION * Update _pkgdown.yml * v2.0 Add unit tests for `as_tibble` and `as.data.frame` (#1723) * Add tests * Add unit tests for as_tibble * Remove comment * Update tbl_stack.R * Use base R pipe * Add test for column grouping * A bit of clean up * Comment code * Remove some snapshot tests * Add test for as.data.frame --------- Co-authored-by: Daniel Sjoberg <[email protected]> * V2.0 `as_kable()` (#1729) * progress * Update import-standalone-stringr.R * V2.0 add unit tests for `add_n` and `add_nevent` to `tbl_uvregression()` (#1725) * add test for add_n.tbl_uvregression() * all tests added and styler * forgot a skip_if_not * adopt feedback * adopt feedback * V2.0 `as_flex_table()` (#1731) * in progress * in progress * stringr updates * Update add_q.R * adding kabel extra output (#1732) * V2.0 as kable extra (#1733) * adding kabel extra output * adding indent * V2.0 `as_hux_table()` (#1735) * in progress * progress * progress * renaming label_style function (#1737) * progress (#1738) * data update * progress (#1739) * progress (#1742) * adding a few tests * V2.0 rename card functions (#1744) * rename some functions * Update _pkgdown.yml * snap updates * progress (#1745) * progress (#1746) * more tests * progress (#1747) * progress * v2.0 Add unit tests for `as_gt` (#1727) * Add tests for as_gt * Fix * Fix * Fix * Test * Test * Rearrange existing * Add tests for as_gt * Update footnotes test * Simplify interpreter test * Add footnotes test * Clean up * Add test for bold/italics * Add test for missing symbols * Add test for column merging * Simplify tests * Add test for missing values * Add tests for formatting functions --------- Co-authored-by: Daniel Sjoberg <[email protected]> * v2.0 Add unit tests for `as_flex_table` (#1752) * Initialize * Add tests * Test for formatting functions * Test for glance statistics * Test tbl_merge * Added explicit test for markdown syntax in headers * V2.0 `tbl_wide_summary()` (#1749) * progress * Update NEWS.md * Update _pkgdown.yml * docs * doc update --------- Co-authored-by: Melkiades <[email protected]> * V2.0 `tbl_ard_wide_summary()` (#1750) * progress * Update NEWS.md * Update _pkgdown.yml * docs * doc update * progress --------- Co-authored-by: Melkiades <[email protected]> * v2.0 Add unit tests for `tbl_merge` (#1754) * Add tests for tbl_merge * Add more tests * Message test * Update test-tbl_merge.R --------- Co-authored-by: Daniel Sjoberg <[email protected]> * V2.0 `inline_text()` (#1751) * Update inline_text.R * in progress * in progress * progress * Update _pkgdown.yml * Update NEWS.md * closes #1755 (#1757) * updates (#1761) * adding tests (#1762) * Create test-select_helpers.R (#1763) * v2.0 Add unit tests for `tbl_stack` (#1756) * Initialize * Reorder * Wrong file * Add tests * Add snapshot * Fix pkg check * Update tbl_stack.md * Add test for mismatched number of columns error * fix --------- Co-authored-by: Daniel Sjoberg <[email protected]> * Update print.R * V2.0 add stat.tbl continuous tests (#1759) * raise attention * need at least this to get old tests working * how to use include for formula formation? * should work * as a fun exercise * add comments * nvm found the issue * DS review updates * move the tests and take in feedback * remove unncessary comments and return tbl_continuous back to original shape * use native pipe only --------- Co-authored-by: Daniel Sjoberg <[email protected]> * Update DESCRIPTION * adding show header fn * website updates * progress * v2.0 Add unit tests for `as_kable` (#1760) * init * Add tests * Updates after review * Fix failing test * Adding `tbl_svysummary()` (#1764) * progress * in progress * in progress * Update DESCRIPTION * progress * V2.0 `add_p.tbl_svysummary()` (#1766) * progress * progress * Update _pkgdown.yml * lil updates * doc updates * V2.0 `add_difference.tbl_svysummary()` (#1768) * Create add_difference.tbl_svysummary.R * progress * Update _pkgdown.yml * progress * V2.0 `add_n.tbl_svysummary()` (#1769) * progress * progress * progress * v2.0 Add unit tests for `as_kable_extra` (#1770) * Add tests * Add test * Clean up * v2.0 additional tests for `tbl uvregression()` (#1730) * there's preexisting add_global_p() tests? * add basic plot test * remove purrr dependencies * swap in tests for each argument * styler and fix errors * adopt feedback * accidentally pushed one * add geepack * new snap * make sure p-values match properly * avoid using example geepack uses * adopt feedback * forgot to push new snap --------- Co-authored-by: Daniel Sjoberg <[email protected]> * progress (#1772) * V2.0 vignettes (#1773) * making progress * progress * updates * V2.0 todo (#1776) * doc updates * snap updates * progress * progress * V2.0 workflows (#1777) * mostly workflow updates * Update test-coverage.yaml * Removing archive of old package version --------- Co-authored-by: Emily de la Rua <[email protected]> Co-authored-by: Zelos Zhu <[email protected]> Co-authored-by: Melkiades <[email protected]>
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What changes are proposed in this pull request?
Part of #1767
If there is an GitHub issue associated with this pull request, please provide link.
Reviewer Checklist (if item does not apply, mark is as complete)
renv::install()
tbl_summary()
, was the same change implemented fortbl_svysummary()
?_pkgdown.yml
pkgdown::build_site()
. Check the R console for errors, and review the rendered website.withr::with_envvar(new = c("NOT_CRAN" = "true"), covr::report())
. Begin in a fresh R session without any packages loaded.usethis::use_spell_check()
runs with no spelling errors in documentationWhen the branch is ready to be merged into master:
NEWS.md
with the changes from this pull request under the heading "# gtsummary (development version)
". If there is an issue associated with the pull request, reference it in parentheses at the end update (seeNEWS.md
for examples).usethis::use_version(which = "dev")
codemetar::write_codemeta()
usethis::use_spell_check()
again