rewrite of the smooth continuum algorithm for speed and stability #886
Workflow file for this run
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - '*' | |
| tags: | |
| - '*' | |
| pull_request: | |
| jobs: | |
| tests: | |
| name: Unit tests | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.10', '3.11'] | |
| env: | |
| DESIUTIL_VERSION: 3.4.3 | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python dependencies | |
| run: | | |
| python -m pip install --upgrade pip setuptools wheel | |
| python -m pip install pytest | |
| python -m pip install git+https://github.com/desihub/desiutil.git@${DESIUTIL_VERSION}#egg=desiutil | |
| python -m pip install -r requirements.txt | |
| - name: Verify Installation | |
| run: pip list | |
| - name: Run the test | |
| run: pytest | |
| coverage: | |
| name: Test coverage | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.10', '3.11'] | |
| env: | |
| DESIUTIL_VERSION: 3.4.3 | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python dependencies | |
| run: | | |
| python -m pip install --upgrade pip setuptools wheel | |
| python -m pip install pytest pytest-cov coveralls | |
| python -m pip install git+https://github.com/desihub/desiutil.git@${DESIUTIL_VERSION}#egg=desiutil | |
| python -m pip install -r requirements.txt | |
| - name: Run the test with coverage | |
| run: pytest --cov | |
| - name: Coveralls | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| COVERALLS_PARALLEL: true | |
| COVERALLS_FLAG_NAME: "${{ matrix.os }},${{ matrix.python-version }},${{ matrix.package_level }}" | |
| COVERALLS_SERVICE_NAME: github | |
| COVERALLS_SERVICE_JOB_ID: "${{ github.run_id }}" | |
| COVERALLS_SERVICE_NUMBER: "${{ github.workflow }}-${{ github.run_number }}" | |
| run: coveralls | |
| docs: | |
| name: Doc test | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.11'] | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python dependencies | |
| run: python -m pip install --upgrade pip setuptools wheel Sphinx sphinx-toolbox | |
| - name: Test the documentation | |
| run: sphinx-build -W --keep-going -b html doc doc/_build/html | |
| style: | |
| name: Style check | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.11'] | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python dependencies | |
| run: python -m pip install --upgrade pip wheel pycodestyle | |
| - name: Test the style; failures are allowed | |
| # This is equivalent to an allowed falure. | |
| continue-on-error: true | |
| run: pycodestyle --count py/fastspecfit |