Merge branch 'main' into rerun_update #445
Workflow file for this run
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - '*' | |
| tags: | |
| - '*' | |
| pull_request: | |
| jobs: | |
| tests: | |
| name: Unit tests | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.8', '3.9', '3.10'] | |
| numpy-version: ['<1.22', '<1.23'] | |
| astropy-version: ['<5.1'] | |
| env: | |
| DESIUTIL_VERSION: 3.2.1 | |
| DESIMODEL_VERSION: main | |
| DESIMETER_VERSION: 0.6.5 | |
| DESIMODEL_DATA: branches/test-0.17 | |
| DESIMODEL: ${{ github.workspace }}/desimodel | |
| DESITARGET_VERSION: 2.2.1 | |
| steps: | |
| - name: Cancel Previous Runs | |
| uses: styfle/[email protected] | |
| with: | |
| access_token: ${{ github.token }} | |
| - name: Checkout | |
| uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python dependencies | |
| run: | | |
| python -m pip install --no-cache-dir --upgrade pip wheel | |
| python -m pip install --no-cache-dir pyyaml requests | |
| python -m pip install --no-cache-dir scipy matplotlib healpy | |
| python -m pip install --no-cache-dir --upgrade "numpy${{ matrix.numpy-version }}" | |
| python -m pip install --no-cache-dir --upgrade "astropy${{ matrix.astropy-version }}" | |
| python -m pip install --no-cache-dir fitsio | |
| python -m pip install --no-cache-dir git+https://github.com/desihub/desiutil.git@${{ env.DESIUTIL_VERSION }}#egg=desiutil | |
| python -m pip install --no-cache-dir git+https://github.com/desihub/desimodel.git@${{ env.DESIMODEL_VERSION }}#egg=desimodel | |
| python -m pip install --no-cache-dir git+https://github.com/desihub/desitarget.git@${{ env.DESITARGET_VERSION }}#egg=desitarget | |
| python -m pip install --no-cache-dir git+https://github.com/desihub/desimeter.git@${{ env.DESIMETER_VERSION }}#egg=desimeter | |
| mkdir -p ${{ env.DESIMODEL }} | |
| svn export https://desi.lbl.gov/svn/code/desimodel/${{ env.DESIMODEL_DATA }}/data ${{ env.DESIMODEL }}/data | |
| - name: Install Fiberassign | |
| run: CC=g++ CXX=g++ CFLAGS="-fPIC" LDSHARED="g++ -shared" python -m pip install -vvv . | |
| - name: Run Tests | |
| run: python -c 'import fiberassign.test; fiberassign.test.runtests()' | |
| docs: | |
| name: Doc test | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.9'] | |
| env: | |
| DESIUTIL_VERSION: 3.2.1 | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python dependencies | |
| run: | | |
| python -m pip install --upgrade pip wheel | |
| python -m pip install -r doc/rtd_requirements.txt | |
| - name: Install desiutil | |
| run: python -m pip install --no-cache-dir git+https://github.com/desihub/desiutil.git@${{ env.DESIUTIL_VERSION }}#egg=desiutil | |
| - name: Compile the package | |
| run: CC=g++ CXX=g++ CFLAGS="-fPIC" LDSHARED="g++ -shared" python setup.py build_ext --inplace | |
| - name: Test the documentation | |
| run: sphinx-build -W --keep-going -b html doc doc/_build/html |