make the ipython kernel step depend on the papermill environment (#113)

dib-lab · Oct 23, 2021 · 68f2bbb · 68f2bbb
1 parent f3d5430
commit 68f2bbb
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/genome_grist/conf/Snakefile b/genome_grist/conf/Snakefile
@@ -552,6 +552,8 @@ rule smash_abundtrim_wc:
 
 # configure ipython kernel for papermill
 rule set_kernel:
+    input:
+        srcdir('env/papermill.yml')
     output:
         touch(f"{outdir}/.kernel.set")
     conda: 'env/papermill.yml'