Add COVID ICD-11 codes #19

dvci · Jun 16, 2023 · bf9314d · bf9314d
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Showing 4 changed files with 209 additions and 9 deletions.
diff --git a/input/fsh/immunization-covid-icd11.fsh b/input/fsh/immunization-covid-icd11.fsh
@@ -0,0 +1,48 @@
+Alias: $icd11-mms = http://id.who.int/icd11/mms
+
+ValueSet: ImmunizationCovidIcd11ValueSet
+Id: immunization-covid-icd11
+Title: "Immunization / COVID / ICD-11"
+Description: "Contains ICD-11 codes that identify specific COVID-19 vaccines for use in SMART Health Cards."
+
+* ^copyright = "International Classification of Diseases, Eleventh Revision (ICD-11), World Health Organization (WHO) 2019/2021. <https://icd.who.int/browse11>. Licensed under [Creative Commons Attribution-NoDerivatives 3.0 IGO licence (CC BY-ND 3.0 IGO)](https://creativecommons.org/licenses/by-nd/3.0/igo/)."
+
+* ^version = "2023.1"
+
+* $icd11-mms#XM68M6 "COVID-19 vaccines"
+* $icd11-mms#XM1NL1 "COVID-19 vaccine, inactivated virus"
+* $icd11-mms#XM7HT3 "CoronaVac®"
+* $icd11-mms#XM8866 "BBIBP-CorV"
+* $icd11-mms#XM9TQ1 "KCONVAC"
+* $icd11-mms#XM1G90 "Covaxin"
+* $icd11-mms#XM85P5 "Covi-Vac"
+* $icd11-mms#XM9FQ7 "Hayat-Vax"
+* $icd11-mms#XM97N6 "Qazvac"
+* $icd11-mms#XM2YG8 "COVIran Barakat"
+* $icd11-mms#XM0K39 "Covidful"
+* $icd11-mms#XM1AU2 "Sinopharm WIBP-CorV"
+* $icd11-mms#XM5DF6 "COVID-19 vaccine, live attenuated virus"
+* $icd11-mms#XM9QW8 "COVID-19 vaccine, non-replicating viral vector"
+* $icd11-mms#XM4YL8 "COVID-19 Vaccine AstraZeneca"
+* $icd11-mms#XM97T2 "Covishield®"
+* $icd11-mms#XM6QV1 "COVID-19 Vaccine Janssen"
+* $icd11-mms#XM1AG7 "Convidecia"
+* $icd11-mms#XM5ZJ4 "Gam-Covid-Vac"
+* $icd11-mms#XM5QM6 "Sputnik-Light"
+* $icd11-mms#XM0CX4 "COVID-19 vaccine, replicating viral vector"
+* $icd11-mms#XM5JC5 "COVID-19 vaccine, virus protein subunit"
+* $icd11-mms#XM3CT4 "Recombinant SARS-CoV-2 vaccine"
+* $icd11-mms#XM3PG0 "Soberana-02"
+* $icd11-mms#XM4EC8 "MVC-COV1901"
+* $icd11-mms#XM6SZ8 "EpiVacCorona"
+* $icd11-mms#XM0RV9 "Soberana Plus"
+* $icd11-mms#XM3SK8 "EpiVacCorona-N"
+* $icd11-mms#XM9P21 "SpikoGen"
+* $icd11-mms#XM9T65 "Novavax COVID-19 vaccine"
+* $icd11-mms#XM9N08 "Razi COV PARS"
+* $icd11-mms#XM1J92 "COVID-19 vaccine, virus like particle"
+* $icd11-mms#XM6AT1 "COVID-19 vaccine, DNA based"
+* $icd11-mms#XM52P3 "ZvCov-D"
+* $icd11-mms#XM0GQ8 "COVID-19 vaccine, RNA based"
+* $icd11-mms#XM8NQ0 "Comirnaty"
+* $icd11-mms#XM3DT5 "COVID-19 Vaccine Moderna"
diff --git a/input/includes/credential_types.html b/input/includes/credential_types.html
@@ -15,7 +15,7 @@
 <ul>
 <li markdown="1">[CVX](ValueSet-immunization-covid-cvx.html)
 </li>
-<li markdown="1">ICD-11 (forthcoming)
+<li markdown="1">[ICD-11](ValueSet-immunization-covid-icd11.html)
 </li>
 <li markdown="1">[SNOMED CT](ValueSet-immunization-covid-snomed.html)
 </li>

diff --git a/input/vocabulary/immunization-covid-all.json b/input/vocabulary/immunization-covid-all.json
@@ -3,10 +3,10 @@
   "id": "immunization-covid-all",
   "language": "en",
   "url": "https://terminology.smarthealth.cards/ValueSet/immunization-covid-all",
-  "version": "20230601",
+  "version": "20230616",
   "name": "ImmunizationCovidAllValueSet",
   "title": "Immunization / COVID / All codes",
-  "date": "2023-06-01",
+  "date": "2023-06-16",
   "status": "active",
   "publisher": "terminology.smarthealth.cards",
   "contact": [
@@ -20,8 +20,8 @@
       ]
     }
   ],
-  "description": "A list of all immunization codes for COVID, combining the following ValueSets: <a href=\"ValueSet-immunization-covid-cvx.html\">ValueSet-immunization-covid-cvx.json</a>; <a href=\"ValueSet-immunization-covid-snomed.html\">ValueSet-immunization-covid-snomed.json</a>",
-  "copyright": "Please see the following links for the copyright/legal information for each code system included here: <a href=\"ValueSet-immunization-covid-cvx.html\">ValueSet-immunization-covid-cvx.json</a>; <a href=\"ValueSet-immunization-covid-snomed.html\">ValueSet-immunization-covid-snomed.json</a>",
+  "description": "A list of all immunization codes for COVID, combining the following ValueSets: <a href=\"ValueSet-immunization-covid-cvx.html\">ValueSet-immunization-covid-cvx.json</a>; <a href=\"ValueSet-immunization-covid-snomed.html\">ValueSet-immunization-covid-snomed.json</a>; <a href=\"ValueSet-immunization-covid-icd11.html\">ValueSet-immunization-covid-icd11.json</a>",
+  "copyright": "Please see the following links for the copyright/legal information for each code system included here: <a href=\"ValueSet-immunization-covid-cvx.html\">ValueSet-immunization-covid-cvx.json</a>; <a href=\"ValueSet-immunization-covid-snomed.html\">ValueSet-immunization-covid-snomed.json</a>; <a href=\"ValueSet-immunization-covid-icd11.html\">ValueSet-immunization-covid-icd11.json</a>",
   "compose": {
     "include": [
       {
@@ -1009,6 +1009,159 @@
             "display": "Janssen COVID-19 Vaccine 0.5 millilitre suspension injection Janssen Inc"
           }
         ]
+      },
+      {
+        "system": "http://id.who.int/icd11/mms",
+        "concept": [
+          {
+            "code": "XM68M6",
+            "display": "COVID-19 vaccines"
+          },
+          {
+            "code": "XM1NL1",
+            "display": "COVID-19 vaccine, inactivated virus"
+          },
+          {
+            "code": "XM7HT3",
+            "display": "CoronaVac\u00ae"
+          },
+          {
+            "code": "XM8866",
+            "display": "BBIBP-CorV"
+          },
+          {
+            "code": "XM9TQ1",
+            "display": "KCONVAC"
+          },
+          {
+            "code": "XM1G90",
+            "display": "Covaxin"
+          },
+          {
+            "code": "XM85P5",
+            "display": "Covi-Vac"
+          },
+          {
+            "code": "XM9FQ7",
+            "display": "Hayat-Vax"
+          },
+          {
+            "code": "XM97N6",
+            "display": "Qazvac"
+          },
+          {
+            "code": "XM2YG8",
+            "display": "COVIran Barakat"
+          },
+          {
+            "code": "XM0K39",
+            "display": "Covidful"
+          },
+          {
+            "code": "XM1AU2",
+            "display": "Sinopharm WIBP-CorV"
+          },
+          {
+            "code": "XM5DF6",
+            "display": "COVID-19 vaccine, live attenuated virus"
+          },
+          {
+            "code": "XM9QW8",
+            "display": "COVID-19 vaccine, non-replicating viral vector"
+          },
+          {
+            "code": "XM4YL8",
+            "display": "COVID-19 Vaccine AstraZeneca"
+          },
+          {
+            "code": "XM97T2",
+            "display": "Covishield\u00ae"
+          },
+          {
+            "code": "XM6QV1",
+            "display": "COVID-19 Vaccine Janssen"
+          },
+          {
+            "code": "XM1AG7",
+            "display": "Convidecia"
+          },
+          {
+            "code": "XM5ZJ4",
+            "display": "Gam-Covid-Vac"
+          },
+          {
+            "code": "XM5QM6",
+            "display": "Sputnik-Light"
+          },
+          {
+            "code": "XM0CX4",
+            "display": "COVID-19 vaccine, replicating viral vector"
+          },
+          {
+            "code": "XM5JC5",
+            "display": "COVID-19 vaccine, virus protein subunit"
+          },
+          {
+            "code": "XM3CT4",
+            "display": "Recombinant SARS-CoV-2 vaccine"
+          },
+          {
+            "code": "XM3PG0",
+            "display": "Soberana-02"
+          },
+          {
+            "code": "XM4EC8",
+            "display": "MVC-COV1901"
+          },
+          {
+            "code": "XM6SZ8",
+            "display": "EpiVacCorona"
+          },
+          {
+            "code": "XM0RV9",
+            "display": "Soberana Plus"
+          },
+          {
+            "code": "XM3SK8",
+            "display": "EpiVacCorona-N"
+          },
+          {
+            "code": "XM9P21",
+            "display": "SpikoGen"
+          },
+          {
+            "code": "XM9T65",
+            "display": "Novavax COVID-19 vaccine"
+          },
+          {
+            "code": "XM9N08",
+            "display": "Razi COV PARS"
+          },
+          {
+            "code": "XM1J92",
+            "display": "COVID-19 vaccine, virus like particle"
+          },
+          {
+            "code": "XM6AT1",
+            "display": "COVID-19 vaccine, DNA based"
+          },
+          {
+            "code": "XM52P3",
+            "display": "ZvCov-D"
+          },
+          {
+            "code": "XM0GQ8",
+            "display": "COVID-19 vaccine, RNA based"
+          },
+          {
+            "code": "XM8NQ0",
+            "display": "Comirnaty"
+          },
+          {
+            "code": "XM3DT5",
+            "display": "COVID-19 Vaccine Moderna"
+          }
+        ]
       }
     ]
   }

diff --git a/script/immunization_all_for_disease/update.py b/script/immunization_all_for_disease/update.py
@@ -5,11 +5,10 @@
 source_files = {
     'COVID': [
         'input/vocabulary/immunization-covid-cvx.json',
-        'fsh-generated/resources/ValueSet-immunization-covid-snomed.json'
+        'fsh-generated/resources/ValueSet-immunization-covid-snomed.json',
+        'fsh-generated/resources/ValueSet-immunization-covid-icd11.json',
     ],
-    'orthopoxvirus': [
-        'input/vocabulary/immunization-orthopoxvirus-cvx.json'
-    ]
+    'orthopoxvirus': ['input/vocabulary/immunization-orthopoxvirus-cvx.json']
 }
 
 root = os.path.abspath(os.path.join(os.path.dirname(__file__), '../..'))