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dweindl · Jul 1, 2024 · b56235a · b56235a
1 parent 4c8319a
commit b56235a
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Showing 3 changed files with 5 additions and 3 deletions.
diff --git a/pytest.ini b/pytest.ini
@@ -5,6 +5,8 @@ addopts = -vv --strict-markers
 filterwarnings =
     # warnings are errors
     error
+    # petab
+    ignore:Using petab.v1.Problem with PEtab2.0 is deprecated:DeprecationWarning
     # amici
     ignore:Conservation laws for non-constant species in models with RateRules are currently not supported and will be turned off.:UserWarning
     ignore:Conservation laws for non-constant species in models with Species-AssignmentRules are currently not supported and will be turned off.:UserWarning

diff --git a/python/tests/splines_utils.py b/python/tests/splines_utils.py
@@ -15,7 +15,7 @@
 import amici
 import numpy as np
 import pandas as pd
-import petab
+import petab.v1 as petab
 import sympy as sp
 from amici.gradient_check import _check_results
 from amici.petab.petab_import import import_petab_problem
@@ -31,7 +31,7 @@
 )
 from amici.splines import AbstractSpline, CubicHermiteSpline, UniformGrid
 from amici.testing import TemporaryDirectoryWinSafe as TemporaryDirectory
-from petab.models.sbml_model import SbmlModel
+from petab.v1.models.sbml_model import SbmlModel
 
 
 def evaluate_spline(

diff --git a/tests/benchmark-models/test_petab_benchmark.py b/tests/benchmark-models/test_petab_benchmark.py
@@ -6,7 +6,7 @@
 import amici
 import numpy as np
 import pandas as pd
-import petab
+import petab.v1 as petab
 import pytest
 from amici.petab.petab_import import import_petab_problem