Added module files to docs

docs/source/epsic_tools.rst

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+epsic\_tools package
+====================
+
+Subpackages
+-----------
+
+.. toctree::
+
+   epsic_tools.signals
+   epsic_tools.toolbox
+
+Submodules
+----------
+
+epsic\_tools.api module
+-----------------------
+
+.. automodule:: epsic_tools.api
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+epsic\_tools.build\_params module
+---------------------------------
+
+.. automodule:: epsic_tools.build_params
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+epsic\_tools.ptychography2D module
+----------------------------------
+
+.. automodule:: epsic_tools.ptychography2D
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+
+Module contents
+---------------
+
+.. automodule:: epsic_tools
+   :members:
+   :undoc-members:
+   :show-inheritance:

docs/source/epsic_tools.signals.rst

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+epsic\_tools.signals package
+============================
+
+Module contents
+---------------
+
+.. automodule:: epsic_tools.signals
+   :members:
+   :undoc-members:
+   :show-inheritance:

docs/source/epsic_tools.toolbox.rst

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+epsic\_tools.toolbox package
+============================
+
+Submodules
+----------
+
+epsic\_tools.toolbox.define\_probe\_function module
+---------------------------------------------------
+
+.. automodule:: epsic_tools.toolbox.define_probe_function
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+epsic\_tools.toolbox.make\_merlin\_mask module
+----------------------------------------------
+
+.. automodule:: epsic_tools.toolbox.make_merlin_mask
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+epsic\_tools.toolbox.make\_merlin\_mask\_test module
+----------------------------------------------------
+
+.. automodule:: epsic_tools.toolbox.make_merlin_mask_test
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+epsic\_tools.toolbox.ptycho\_utils module
+-----------------------------------------
+
+.. automodule:: epsic_tools.toolbox.ptycho_utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+epsic\_tools.toolbox.radial\_profile module
+-------------------------------------------
+
+.. automodule:: epsic_tools.toolbox.radial_profile
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+epsic\_tools.toolbox.sim\_utils module
+--------------------------------------
+
+.. automodule:: epsic_tools.toolbox.sim_utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+epsic\_tools.toolbox.warp\_3d module
+------------------------------------
+
+.. automodule:: epsic_tools.toolbox.warp_3d
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+
+Module contents
+---------------
+
+.. automodule:: epsic_tools.toolbox
+   :members:
+   :undoc-members:
+   :show-inheritance:

docs/source/modules.rst

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+epsic_tools
+===========
+
+.. toctree::
+   :maxdepth: 4
+
+   epsic_tools