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{bio}[foss/2023a] OpenForceField-Toolkit v0.16.0 #20852

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Original file line number Diff line number Diff line change
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easyblock = 'PythonBundle'

name = 'OpenForceField-Toolkit'
version = '0.16.0'

homepage = 'https://github.com/openforcefield/openff-toolkit'
description = """The Open Force Field Toolkit provides implementations of the SMIRNOFF format,
parameterization engine, and other tools."""

toolchain = {'name': 'foss', 'version': '2023a'}

builddependencies = [('poetry', '1.5.1')]
dependencies = [
('Python', '3.11.3'),
('Python-bundle-PyPI', '2023.06'),
('SciPy-bundle', '2023.07'),
('networkx', '3.1'),
('typing-extensions', '4.9.0'),
('pydantic', '2.5.3'),
('tqdm', '4.66.1'),
('OpenMM', '8.0.0'),
('PyYAML', '6.0'),
('RDKit', '2024.03.3'),
('MDTraj', '1.9.9'),
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('JupyterNotebook', '7.0.2'),
('AmberTools', '23.6'),
('Pint', '0.23'),
('nglview', '3.1.2'),
]

use_pip = True

exts_list = [
('qcelemental', '0.26.0', {
'checksums': ['a14e8510cdbfda645ef1461c1afd02efb599311733dbba5f83fcd1d6168a6ddd'],
}),
('PyJWT', '2.8.0', {
'modulename': 'jwt',
'checksums': ['57e28d156e3d5c10088e0c68abb90bfac3df82b40a71bd0daa20c65ccd5c23de'],
}),
('apsw', '3.46.0.0', {
'checksums': ['e128ccaab511f9a7fc48be6414f99a9197f83a69624d8ba40c1ca241bdef418e'],
}),
('zstandard', '0.18.0', {
'checksums': ['0ac0357a0d985b4ff31a854744040d7b5754385d1f98f7145c30e02c6865cb6f'],
}),
('qcportal', '0.55', {
'source_tmpl': '%(name)s-%(version)s-py3-none-any.whl',
'checksums': ['f6eb86d6ace4ae6a71bbd8e2ee054305aff2c1da0198a3741b0d589c572a31b3'],
}),
('cached-property', '1.5.2', {
'checksums': ['9fa5755838eecbb2d234c3aa390bd80fbd3ac6b6869109bfc1b499f7bd89a130'],
}),
('cachetools', '5.3.3', {
'checksums': ['ba29e2dfa0b8b556606f097407ed1aa62080ee108ab0dc5ec9d6a723a007d105'],
}),
('python-constraint', '1.4.0', {
'modulename': 'constraint',
'source_tmpl': '%(name)s-%(version)s.tar.bz2',
'checksums': ['501d6f17afe0032dfc6ea6c0f8acc12e44f992733f00e8538961031ef27ccb8e'],
}),
('bson', '0.5.10', {
'checksums': ['d6511b2ab051139a9123c184de1a04227262173ad593429d21e443d6462d6590'],
}),
('xmltodict', '0.13.0', {
'checksums': ['341595a488e3e01a85a9d8911d8912fd922ede5fecc4dce437eb4b6c8d037e56'],
}),
('intermol', '0.1.2', {
'source_urls': ['https://github.com/shirtsgroup/InterMol/archive/'],
'sources': [{'download_filename': 'v%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
'checksums': ['a3065133ba16585a5db3807466a36242d191156525c33079cf46a97cedcfe835'],
}),
('SMIRNOFF99Frosst', '1.1.0', {
'source_urls': ['https://github.com/openforcefield/smirnoff99Frosst/archive/'],
'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
'checksums': ['940c4ed3cd720e746549a3335f10b7b0d9047a67bc216ad45dd875be5c8ec467'],
}),
('SMIRNOFF-Plugins', '2024.01.0', {
'source_urls': ['https://github.com/openforcefield/smirnoff-plugins/archive/'],
'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
'checksums': ['8ba4dbc6ed320f06f30bf42e8f70399bc3818becd668990693b51ddca183ff74'],
}),
('OpenForceField-ForceFields', '2024.04.0', {
'modulename': 'openforcefields',
'source_urls': ['https://github.com/openforcefield/openff-forcefields/archive/'],
'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
'checksums': ['fc7094cdb74bf9f0ed665dfc716cc62c5a37def3fc7e852adeae0ae4b60169c7'],
}),
('OpenForceField-Amber-FF-Ports', '0.0.4', {
'modulename': 'openff.amber_ff_ports',
'source_urls': ['https://github.com/openforcefield/openff-amber-ff-ports/archive/'],
'sources': [{'download_filename': 'v%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
'checksums': ['dbf2d1ccce06b0627b1eccae7e227ad800ff1cbac3e869344de265b178cc0207'],
}),
('OpenForceField-Utilities', '0.1.12', {
'modulename': 'openff.utilities',
'source_urls': ['https://github.com/openforcefield/openff-utilities/archive/'],
'sources': [{'download_filename': 'v%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
'checksums': ['92882c5b87b40bdb4ee1e8c84c0ecc0fc83f26eaf3e3befde41bfdcf93d75dea'],
}),
('OpenForceField-Units', '0.2.2', {
'modulename': 'openff.units',
'source_urls': ['https://github.com/openforcefield/openff-units/archive/'],
'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
'checksums': ['532746534c1937938580d5cfe98f414aff9bfbcc66970e115a88a38f6d5a2581'],
}),
('OpenForceField-NAGL-Models', '0.2.0', {
'modulename': 'openff.nagl_models',
'source_urls': ['https://github.com/openforcefield/openff-nagl-models/archive/'],
'sources': [{'download_filename': 'v%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
'checksums': ['5ccc55d7f0fcd24577796fd8b2bfd85b035ee8060e441c1f7dfc6f1949b9dee5'],
}),
('OpenForceField-Models', '0.1.2', {
'modulename': 'openff.models',
'source_urls': ['https://github.com/openforcefield/openff-models/archive/'],
'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
'checksums': ['cf2aa7ef467721f141149e4ce96134db390b27012f09996c4442a3fad2371653'],
}),
('OpenForceField-Interchange', '0.3.27', {
'modulename': 'openff.interchange',
'source_urls': ['https://github.com/openforcefield/openff-interchange/archive/'],
'sources': [{'download_filename': 'v%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
'checksums': ['6b44ba8a89921b3843a5f9fc41dc4f8a0c784ba12221e3ea0fb8c1b01a10cf2e'],
}),
(name, version, {
'modulename': 'openff.toolkit',
'source_urls': ['https://github.com/openforcefield/openff-toolkit/archive/'],
'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
'checksums': ['70a81e914e86efd933819a5db05fc4400dcd23e12ad29398fdad46f2765b5634'],
}),
]

sanity_check_commands = [
"python -c 'from openff.toolkit import Molecule, Topology, ForceField'",
"python -c 'from openff.interchange import Interchange'",
"python -c 'from openff.units import unit'",
"python -c 'from openff.interchange.components.mdconfig import MDConfig'",
"python -c 'from openff.interchange.models import TopologyKey'",
"python -c 'from openff.toolkit.typing.engines.smirnoff import ForceField'",
]

sanity_pip_check = True

moduleclass = 'bio'
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